Gene : Phvul.001G256400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10314//PTHR10314:SF70 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2545
Name:  ? Phvul.001G256400 Secondary Identifier:  ? PAC:37168726
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G256400 0.5kb upstream 0.5kb upstream 4363 true Chr01: 50563222-50567584 Phaseolus vulgaris
Phvul.001G256400 0.5kb upstream 0.5kb upstream 500 false Chr01: 50567085-50567584 Phaseolus vulgaris
Phvul.001G256400 0.5kb downstream 0.5kb downstream 4363 true Chr01: 50562722-50567084 Phaseolus vulgaris
Phvul.001G256400 0.5kb downstream 0.5kb downstream 500 false Chr01: 50562722-50563221 Phaseolus vulgaris
Phvul.001G256400 1.0kb upstream 1.0kb upstream 4863 true Chr01: 50563222-50568084 Phaseolus vulgaris
Phvul.001G256400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50567085-50568084 Phaseolus vulgaris
Phvul.001G256400 1.0kb downstream 1.0kb downstream 4863 true Chr01: 50562222-50567084 Phaseolus vulgaris
Phvul.001G256400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50562222-50563221 Phaseolus vulgaris
Phvul.001G256400 2.0kb upstream 2.0kb upstream 5863 true Chr01: 50563222-50569084 Phaseolus vulgaris
Phvul.001G256400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50567085-50569084 Phaseolus vulgaris
Phvul.001G256400 2.0kb downstream 2.0kb downstream 5863 true Chr01: 50561222-50567084 Phaseolus vulgaris
Phvul.001G256400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50561222-50563221 Phaseolus vulgaris
Phvul.001G256400 5.0kb upstream 5.0kb upstream 8863 true Chr01: 50563222-50572084 Phaseolus vulgaris
Phvul.001G256400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50567085-50572084 Phaseolus vulgaris
Phvul.001G256400 5.0kb downstream 5.0kb downstream 8863 true Chr01: 50558222-50567084 Phaseolus vulgaris
Phvul.001G256400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50558222-50563221 Phaseolus vulgaris
Phvul.001G256400 10.0kb upstream 10.0kb upstream 13863 true Chr01: 50563222-50577084 Phaseolus vulgaris
Phvul.001G256400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50567085-50577084 Phaseolus vulgaris
Phvul.001G256400 10.0kb downstream 10.0kb downstream 13863 true Chr01: 50553222-50567084 Phaseolus vulgaris
Phvul.001G256400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50553222-50563221 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301096 5265 Fabidae View MSA
124062941 5270 Rosid View MSA
123740712 5271 Pentapetalae View MSA
122793656 5272 Eudicot View MSA
122051131 5273 Angiosperm View MSA
121346707 5274 Embryophyte View MSA
123428019 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.824101 0.0 2.92908   Low
cufflinks 1.95811 0.0 6.34112   High
cufflinks 2.61064 0.0 8.15473   High
cufflinks 1.00938 0.0 3.56031    
cufflinks 1.45198 0.0 4.90402    
cufflinks 1.90242 0.0 6.17486   High
cufflinks 1.25684 0.0 4.28319    
cufflinks 0.984686 0.0 3.43231    
cufflinks 0.772688 0.0 2.77624   Low
cufflinks 1.05207 0.0 3.66251    
cufflinks 1.12053 0.0 3.88494    

0 Strain