Gene : Phvul.002G107400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15217 - WILMS' TUMOR 1-ASSOCIATING PROTEIN Genomic Order:  1075
Name:  ? Phvul.002G107400 Secondary Identifier:  ? PAC:37178103
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G107400 0.5kb upstream 0.5kb upstream 14227 true Chr02: 22958485-22972711 Phaseolus vulgaris
Phvul.002G107400 0.5kb upstream 0.5kb upstream 500 false Chr02: 22958485-22958984 Phaseolus vulgaris
Phvul.002G107400 0.5kb downstream 0.5kb downstream 14227 true Chr02: 22958985-22973211 Phaseolus vulgaris
Phvul.002G107400 0.5kb downstream 0.5kb downstream 500 false Chr02: 22972712-22973211 Phaseolus vulgaris
Phvul.002G107400 1.0kb upstream 1.0kb upstream 14727 true Chr02: 22957985-22972711 Phaseolus vulgaris
Phvul.002G107400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 22957985-22958984 Phaseolus vulgaris
Phvul.002G107400 1.0kb downstream 1.0kb downstream 14727 true Chr02: 22958985-22973711 Phaseolus vulgaris
Phvul.002G107400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 22972712-22973711 Phaseolus vulgaris
Phvul.002G107400 2.0kb upstream 2.0kb upstream 15727 true Chr02: 22956985-22972711 Phaseolus vulgaris
Phvul.002G107400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 22956985-22958984 Phaseolus vulgaris
Phvul.002G107400 2.0kb downstream 2.0kb downstream 15727 true Chr02: 22958985-22974711 Phaseolus vulgaris
Phvul.002G107400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 22972712-22974711 Phaseolus vulgaris
Phvul.002G107400 5.0kb upstream 5.0kb upstream 18727 true Chr02: 22953985-22972711 Phaseolus vulgaris
Phvul.002G107400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 22953985-22958984 Phaseolus vulgaris
Phvul.002G107400 5.0kb downstream 5.0kb downstream 18727 true Chr02: 22958985-22977711 Phaseolus vulgaris
Phvul.002G107400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 22972712-22977711 Phaseolus vulgaris
Phvul.002G107400 10.0kb upstream 10.0kb upstream 23727 true Chr02: 22948985-22972711 Phaseolus vulgaris
Phvul.002G107400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 22948985-22958984 Phaseolus vulgaris
Phvul.002G107400 10.0kb downstream 10.0kb downstream 23727 true Chr02: 22958985-22982711 Phaseolus vulgaris
Phvul.002G107400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 22972712-22982711 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310252 5265 Fabidae View MSA
124060684 5270 Rosid View MSA
123743181 5271 Pentapetalae View MSA
122795045 5272 Eudicot View MSA
122047600 5273 Angiosperm View MSA
123429059 5275 Viridiplantae View MSA
121346918 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.98977 0.0 24.9551    
cufflinks 10.37 0.0 28.466    
cufflinks 10.6587 0.0 29.1382    
cufflinks 8.50499 0.0 23.9213    
cufflinks 8.14402 0.0 23.0221    
cufflinks 10.064 0.0 27.6854    
cufflinks 11.0835 0.0 30.1764    
cufflinks 13.0764 0.0 35.0608   High
cufflinks 10.1572 0.0 27.8766    
cufflinks 6.4347 0.0 18.491   Low
cufflinks 10.0018 0.0 27.6647    

0 Strain