Gene : Phvul.002G086800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR35476:SF2 - MUCIN-RELATED PROTEIN Genomic Order:  874
Name:  ? Phvul.002G086800 Secondary Identifier:  ? PAC:37176572
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G086800 0.5kb upstream 0.5kb upstream 3551 true Chr02: 14234749-14238299 Phaseolus vulgaris
Phvul.002G086800 0.5kb upstream 0.5kb upstream 500 false Chr02: 14237800-14238299 Phaseolus vulgaris
Phvul.002G086800 0.5kb downstream 0.5kb downstream 3551 true Chr02: 14234249-14237799 Phaseolus vulgaris
Phvul.002G086800 0.5kb downstream 0.5kb downstream 500 false Chr02: 14234249-14234748 Phaseolus vulgaris
Phvul.002G086800 1.0kb upstream 1.0kb upstream 4051 true Chr02: 14234749-14238799 Phaseolus vulgaris
Phvul.002G086800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14237800-14238799 Phaseolus vulgaris
Phvul.002G086800 1.0kb downstream 1.0kb downstream 4051 true Chr02: 14233749-14237799 Phaseolus vulgaris
Phvul.002G086800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14233749-14234748 Phaseolus vulgaris
Phvul.002G086800 2.0kb upstream 2.0kb upstream 5051 true Chr02: 14234749-14239799 Phaseolus vulgaris
Phvul.002G086800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14237800-14239799 Phaseolus vulgaris
Phvul.002G086800 2.0kb downstream 2.0kb downstream 5051 true Chr02: 14232749-14237799 Phaseolus vulgaris
Phvul.002G086800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14232749-14234748 Phaseolus vulgaris
Phvul.002G086800 5.0kb upstream 5.0kb upstream 8051 true Chr02: 14234749-14242799 Phaseolus vulgaris
Phvul.002G086800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14237800-14242799 Phaseolus vulgaris
Phvul.002G086800 5.0kb downstream 5.0kb downstream 8051 true Chr02: 14229749-14237799 Phaseolus vulgaris
Phvul.002G086800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14229749-14234748 Phaseolus vulgaris
Phvul.002G086800 10.0kb upstream 10.0kb upstream 13051 true Chr02: 14234749-14247799 Phaseolus vulgaris
Phvul.002G086800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14237800-14247799 Phaseolus vulgaris
Phvul.002G086800 10.0kb downstream 10.0kb downstream 13051 true Chr02: 14224749-14237799 Phaseolus vulgaris
Phvul.002G086800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14224749-14234748 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041068 5273 Angiosperm View MSA
122300527 5265 Fabidae View MSA
124067494 5270 Rosid View MSA
123738952 5271 Pentapetalae View MSA
122792468 5272 Eudicot View MSA
121349473 5274 Embryophyte View MSA
123424597 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.52368 0.0 25.4444   High
cufflinks 7.54979 0.0 20.5916    
cufflinks 9.37524 0.0 25.2178   High
cufflinks 7.29575 0.0 20.0385    
cufflinks 7.49314 0.0 20.5272    
cufflinks 7.99941 0.0 21.6991    
cufflinks 4.918 0.0 13.8586   Low
cufflinks 5.3075 0.0 14.9129   Low
cufflinks 6.18121 0.0 17.0606    
cufflinks 8.40633 0.0 22.7571    
cufflinks 8.57366 0.0 23.1359    

0 Strain