Gene : Phvul.002G090200 P. vulgaris v2.1
Defline:  (1 of 2) KOG2861 - Uncharacterized conserved protein Genomic Order:  896
Name:  ? Phvul.002G090200 Secondary Identifier:  ? PAC:37177470
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G090200 0.5kb upstream 0.5kb upstream 3682 true Chr02: 15628191-15631872 Phaseolus vulgaris
Phvul.002G090200 0.5kb upstream 0.5kb upstream 500 false Chr02: 15631373-15631872 Phaseolus vulgaris
Phvul.002G090200 0.5kb downstream 0.5kb downstream 3682 true Chr02: 15627691-15631372 Phaseolus vulgaris
Phvul.002G090200 0.5kb downstream 0.5kb downstream 500 false Chr02: 15627691-15628190 Phaseolus vulgaris
Phvul.002G090200 1.0kb upstream 1.0kb upstream 4182 true Chr02: 15628191-15632372 Phaseolus vulgaris
Phvul.002G090200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15631373-15632372 Phaseolus vulgaris
Phvul.002G090200 1.0kb downstream 1.0kb downstream 4182 true Chr02: 15627191-15631372 Phaseolus vulgaris
Phvul.002G090200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15627191-15628190 Phaseolus vulgaris
Phvul.002G090200 2.0kb upstream 2.0kb upstream 5182 true Chr02: 15628191-15633372 Phaseolus vulgaris
Phvul.002G090200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15631373-15633372 Phaseolus vulgaris
Phvul.002G090200 2.0kb downstream 2.0kb downstream 5182 true Chr02: 15626191-15631372 Phaseolus vulgaris
Phvul.002G090200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15626191-15628190 Phaseolus vulgaris
Phvul.002G090200 5.0kb upstream 5.0kb upstream 8182 true Chr02: 15628191-15636372 Phaseolus vulgaris
Phvul.002G090200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15631373-15636372 Phaseolus vulgaris
Phvul.002G090200 5.0kb downstream 5.0kb downstream 8182 true Chr02: 15623191-15631372 Phaseolus vulgaris
Phvul.002G090200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15623191-15628190 Phaseolus vulgaris
Phvul.002G090200 10.0kb upstream 10.0kb upstream 13182 true Chr02: 15628191-15641372 Phaseolus vulgaris
Phvul.002G090200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15631373-15641372 Phaseolus vulgaris
Phvul.002G090200 10.0kb downstream 10.0kb downstream 13182 true Chr02: 15618191-15631372 Phaseolus vulgaris
Phvul.002G090200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15618191-15628190 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309000 5265 Fabidae View MSA
124062817 5270 Rosid View MSA
123736461 5271 Pentapetalae View MSA
122793751 5272 Eudicot View MSA
122049047 5273 Angiosperm View MSA
121345242 5274 Embryophyte View MSA
123425933 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.50779 0.0 24.6175    
cufflinks 1.83938 0.0 9.92722   Low
cufflinks 5.05081 0.0 23.2208    
cufflinks 7.3071 0.0 31.1128   High
cufflinks 3.29041 0.0 17.3692    
cufflinks 4.111 0.0 19.9107    
cufflinks 4.79744 0.0 22.2479    
cufflinks 4.6815 0.0 21.6197    
cufflinks 5.04038 0.0 23.5032    
cufflinks 4.24467 0.0 21.2058    
cufflinks 3.36103 0.0 17.5909    

0 Strain