Gene : Phvul.002G090566 P. vulgaris v2.1
Defline:  (1 of 7) K02992 - small subunit ribosomal protein S7 (RP-S7, MRPS7, rpsG) Genomic Order:  905
Name:  ? Phvul.002G090566 Secondary Identifier:  ? PAC:37177212
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G090566 0.5kb upstream 0.5kb upstream 1767 true Chr02: 15674002-15675768 Phaseolus vulgaris
Phvul.002G090566 0.5kb upstream 0.5kb upstream 500 false Chr02: 15675269-15675768 Phaseolus vulgaris
Phvul.002G090566 0.5kb downstream 0.5kb downstream 1767 true Chr02: 15673502-15675268 Phaseolus vulgaris
Phvul.002G090566 0.5kb downstream 0.5kb downstream 500 false Chr02: 15673502-15674001 Phaseolus vulgaris
Phvul.002G090566 1.0kb upstream 1.0kb upstream 2267 true Chr02: 15674002-15676268 Phaseolus vulgaris
Phvul.002G090566 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15675269-15676268 Phaseolus vulgaris
Phvul.002G090566 1.0kb downstream 1.0kb downstream 2267 true Chr02: 15673002-15675268 Phaseolus vulgaris
Phvul.002G090566 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15673002-15674001 Phaseolus vulgaris
Phvul.002G090566 2.0kb upstream 2.0kb upstream 3267 true Chr02: 15674002-15677268 Phaseolus vulgaris
Phvul.002G090566 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15675269-15677268 Phaseolus vulgaris
Phvul.002G090566 2.0kb downstream 2.0kb downstream 3267 true Chr02: 15672002-15675268 Phaseolus vulgaris
Phvul.002G090566 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15672002-15674001 Phaseolus vulgaris
Phvul.002G090566 5.0kb upstream 5.0kb upstream 6267 true Chr02: 15674002-15680268 Phaseolus vulgaris
Phvul.002G090566 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15675269-15680268 Phaseolus vulgaris
Phvul.002G090566 5.0kb downstream 5.0kb downstream 6267 true Chr02: 15669002-15675268 Phaseolus vulgaris
Phvul.002G090566 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15669002-15674001 Phaseolus vulgaris
Phvul.002G090566 10.0kb upstream 10.0kb upstream 11267 true Chr02: 15674002-15685268 Phaseolus vulgaris
Phvul.002G090566 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15675269-15685268 Phaseolus vulgaris
Phvul.002G090566 10.0kb downstream 10.0kb downstream 11267 true Chr02: 15664002-15675268 Phaseolus vulgaris
Phvul.002G090566 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15664002-15674001 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311142 5265 Fabidae View MSA
124062510 5270 Rosid View MSA
123751688 5271 Pentapetalae View MSA
122794241 5272 Eudicot View MSA
122047830 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121350672 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.80504 0.0 6.11649    
cufflinks 1.58394 0.0 5.47038    
cufflinks 18.8081 0.0 50.2141   High
cufflinks 7.14298 0.0 20.942    
cufflinks 5.3651 0.0 16.2727    
cufflinks 30.7596 0.0 79.8665   High
cufflinks 0.849877 0.0 3.1057   Low
cufflinks 2.28236 0.0 7.46223    
cufflinks 1.52965 0.0 5.28765    
cufflinks 7.08707 0.0 20.6803    
cufflinks 1.49306 0.0 5.21384    

0 Strain