Gene : Phvul.002G079500 P. vulgaris v2.1
Genomic Order:  799 Name:  ? Phvul.002G079500
Secondary Identifier:  ? PAC:37176708
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G079500 0.5kb upstream 0.5kb upstream 13745 true Chr02: 12338597-12352341 Phaseolus vulgaris
Phvul.002G079500 0.5kb upstream 0.5kb upstream 500 false Chr02: 12338597-12339096 Phaseolus vulgaris
Phvul.002G079500 0.5kb downstream 0.5kb downstream 13745 true Chr02: 12339097-12352841 Phaseolus vulgaris
Phvul.002G079500 0.5kb downstream 0.5kb downstream 500 false Chr02: 12352342-12352841 Phaseolus vulgaris
Phvul.002G079500 1.0kb upstream 1.0kb upstream 14245 true Chr02: 12338097-12352341 Phaseolus vulgaris
Phvul.002G079500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12338097-12339096 Phaseolus vulgaris
Phvul.002G079500 1.0kb downstream 1.0kb downstream 14245 true Chr02: 12339097-12353341 Phaseolus vulgaris
Phvul.002G079500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12352342-12353341 Phaseolus vulgaris
Phvul.002G079500 2.0kb upstream 2.0kb upstream 15245 true Chr02: 12337097-12352341 Phaseolus vulgaris
Phvul.002G079500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12337097-12339096 Phaseolus vulgaris
Phvul.002G079500 2.0kb downstream 2.0kb downstream 15245 true Chr02: 12339097-12354341 Phaseolus vulgaris
Phvul.002G079500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12352342-12354341 Phaseolus vulgaris
Phvul.002G079500 5.0kb upstream 5.0kb upstream 18245 true Chr02: 12334097-12352341 Phaseolus vulgaris
Phvul.002G079500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12334097-12339096 Phaseolus vulgaris
Phvul.002G079500 5.0kb downstream 5.0kb downstream 18245 true Chr02: 12339097-12357341 Phaseolus vulgaris
Phvul.002G079500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12352342-12357341 Phaseolus vulgaris
Phvul.002G079500 10.0kb upstream 10.0kb upstream 23245 true Chr02: 12329097-12352341 Phaseolus vulgaris
Phvul.002G079500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12329097-12339096 Phaseolus vulgaris
Phvul.002G079500 10.0kb downstream 10.0kb downstream 23245 true Chr02: 12339097-12362341 Phaseolus vulgaris
Phvul.002G079500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12352342-12362341 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027878 5273 Angiosperm View MSA
122310737 5265 Fabidae View MSA
124037163 5270 Rosid View MSA
123745151 5271 Pentapetalae View MSA
122785717 5272 Eudicot View MSA
121297463 5274 Embryophyte View MSA
123335519 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.342109 0.0 1.33793 Low  
cufflinks 1.03322 0.0 6.23295   High
cufflinks 0.396796 0.0 1.95778 Low  
cufflinks 0.326639 0.0 1.29547 Low  
cufflinks 0.288808 0.0 1.15339 Low Low
cufflinks 0.523806 0.0 2.45429 Low  
cufflinks 0.313633 0.0 1.23037 Low  
cufflinks 0.298693 0.0 2.25051 Low  
cufflinks 0.5315 0.0 2.42198    
cufflinks 0.510311 0.0 3.64214    
cufflinks 0.475349 0.0 2.24064 Low  

0 Strain