Gene : Phvul.002G083200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR35705:SF2 - WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 2 Genomic Order:  837
Name:  ? Phvul.002G083200 Secondary Identifier:  ? PAC:37175280
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G083200 0.5kb upstream 0.5kb upstream 11982 true Chr02: 13277509-13289490 Phaseolus vulgaris
Phvul.002G083200 0.5kb upstream 0.5kb upstream 500 false Chr02: 13277509-13278008 Phaseolus vulgaris
Phvul.002G083200 0.5kb downstream 0.5kb downstream 11982 true Chr02: 13278009-13289990 Phaseolus vulgaris
Phvul.002G083200 0.5kb downstream 0.5kb downstream 500 false Chr02: 13289491-13289990 Phaseolus vulgaris
Phvul.002G083200 1.0kb upstream 1.0kb upstream 12482 true Chr02: 13277009-13289490 Phaseolus vulgaris
Phvul.002G083200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13277009-13278008 Phaseolus vulgaris
Phvul.002G083200 1.0kb downstream 1.0kb downstream 12482 true Chr02: 13278009-13290490 Phaseolus vulgaris
Phvul.002G083200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13289491-13290490 Phaseolus vulgaris
Phvul.002G083200 2.0kb upstream 2.0kb upstream 13482 true Chr02: 13276009-13289490 Phaseolus vulgaris
Phvul.002G083200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13276009-13278008 Phaseolus vulgaris
Phvul.002G083200 2.0kb downstream 2.0kb downstream 13482 true Chr02: 13278009-13291490 Phaseolus vulgaris
Phvul.002G083200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13289491-13291490 Phaseolus vulgaris
Phvul.002G083200 5.0kb upstream 5.0kb upstream 16482 true Chr02: 13273009-13289490 Phaseolus vulgaris
Phvul.002G083200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13273009-13278008 Phaseolus vulgaris
Phvul.002G083200 5.0kb downstream 5.0kb downstream 16482 true Chr02: 13278009-13294490 Phaseolus vulgaris
Phvul.002G083200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13289491-13294490 Phaseolus vulgaris
Phvul.002G083200 10.0kb upstream 10.0kb upstream 21482 true Chr02: 13268009-13289490 Phaseolus vulgaris
Phvul.002G083200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13268009-13278008 Phaseolus vulgaris
Phvul.002G083200 10.0kb downstream 10.0kb downstream 21482 true Chr02: 13278009-13299490 Phaseolus vulgaris
Phvul.002G083200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13289491-13299490 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299087 5265 Fabidae View MSA
124064704 5270 Rosid View MSA
123737146 5271 Pentapetalae View MSA
122786197 5272 Eudicot View MSA
122042229 5273 Angiosperm View MSA
121309938 5274 Embryophyte View MSA
123347566 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.33914 0.0 9.52399    
cufflinks 4.7106 0.0 13.0392    
cufflinks 14.9997 0.0 38.7781   High
cufflinks 1.70081 0.0 5.30645   Low
cufflinks 2.89485 0.0 8.50314    
cufflinks 11.5601 0.0 30.0505   High
cufflinks 5.53983 0.0 15.1398    
cufflinks 4.09322 0.0 11.4049    
cufflinks 6.72326 0.0 18.1033    
cufflinks 3.86232 0.0 10.8987    
cufflinks 3.5512 0.0 10.1681    

0 Strain