Gene : Phvul.002G083700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13068//PTHR13068:SF36 - CGI-12 PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  842
Name:  ? Phvul.002G083700 Secondary Identifier:  ? PAC:37174803
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G083700 0.5kb upstream 0.5kb upstream 2222 true Chr02: 13397720-13399941 Phaseolus vulgaris
Phvul.002G083700 0.5kb upstream 0.5kb upstream 500 false Chr02: 13397720-13398219 Phaseolus vulgaris
Phvul.002G083700 0.5kb downstream 0.5kb downstream 2222 true Chr02: 13398220-13400441 Phaseolus vulgaris
Phvul.002G083700 0.5kb downstream 0.5kb downstream 500 false Chr02: 13399942-13400441 Phaseolus vulgaris
Phvul.002G083700 1.0kb upstream 1.0kb upstream 2722 true Chr02: 13397220-13399941 Phaseolus vulgaris
Phvul.002G083700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13397220-13398219 Phaseolus vulgaris
Phvul.002G083700 1.0kb downstream 1.0kb downstream 2722 true Chr02: 13398220-13400941 Phaseolus vulgaris
Phvul.002G083700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13399942-13400941 Phaseolus vulgaris
Phvul.002G083700 2.0kb upstream 2.0kb upstream 3722 true Chr02: 13396220-13399941 Phaseolus vulgaris
Phvul.002G083700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13396220-13398219 Phaseolus vulgaris
Phvul.002G083700 2.0kb downstream 2.0kb downstream 3722 true Chr02: 13398220-13401941 Phaseolus vulgaris
Phvul.002G083700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13399942-13401941 Phaseolus vulgaris
Phvul.002G083700 5.0kb upstream 5.0kb upstream 6722 true Chr02: 13393220-13399941 Phaseolus vulgaris
Phvul.002G083700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13393220-13398219 Phaseolus vulgaris
Phvul.002G083700 5.0kb downstream 5.0kb downstream 6722 true Chr02: 13398220-13404941 Phaseolus vulgaris
Phvul.002G083700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13399942-13404941 Phaseolus vulgaris
Phvul.002G083700 10.0kb upstream 10.0kb upstream 11722 true Chr02: 13388220-13399941 Phaseolus vulgaris
Phvul.002G083700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13388220-13398219 Phaseolus vulgaris
Phvul.002G083700 10.0kb downstream 10.0kb downstream 11722 true Chr02: 13398220-13409941 Phaseolus vulgaris
Phvul.002G083700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13399942-13409941 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308705 5265 Fabidae View MSA
124067504 5270 Rosid View MSA
123741152 5271 Pentapetalae View MSA
122793489 5272 Eudicot View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.19228 0.0 6.91213    
cufflinks 2.71233 0.0 8.38895    
cufflinks 5.33091 0.0 15.2372   High
cufflinks 2.98807 0.0 9.13847    
cufflinks 2.45038 0.0 7.63998    
cufflinks 5.75989 0.0 16.3614   High
cufflinks 0.478294 0.0 1.77318 Low Low
cufflinks 0.560739 0.0 2.04893   Low
cufflinks 0.390092 0.0 1.47556 Low Low
cufflinks 2.05227 0.0 6.54496    
cufflinks 2.17588 0.0 6.89422    

0 Strain