Gene : Phvul.002G083600 P. vulgaris v2.1
Defline:  (1 of 37) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  841
Name:  ? Phvul.002G083600 Secondary Identifier:  ? PAC:37175720
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G083600 0.5kb upstream 0.5kb upstream 2620 true Chr02: 13379701-13382320 Phaseolus vulgaris
Phvul.002G083600 0.5kb upstream 0.5kb upstream 500 false Chr02: 13379701-13380200 Phaseolus vulgaris
Phvul.002G083600 0.5kb downstream 0.5kb downstream 2620 true Chr02: 13380201-13382820 Phaseolus vulgaris
Phvul.002G083600 0.5kb downstream 0.5kb downstream 500 false Chr02: 13382321-13382820 Phaseolus vulgaris
Phvul.002G083600 1.0kb upstream 1.0kb upstream 3120 true Chr02: 13379201-13382320 Phaseolus vulgaris
Phvul.002G083600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13379201-13380200 Phaseolus vulgaris
Phvul.002G083600 1.0kb downstream 1.0kb downstream 3120 true Chr02: 13380201-13383320 Phaseolus vulgaris
Phvul.002G083600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13382321-13383320 Phaseolus vulgaris
Phvul.002G083600 2.0kb upstream 2.0kb upstream 4120 true Chr02: 13378201-13382320 Phaseolus vulgaris
Phvul.002G083600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13378201-13380200 Phaseolus vulgaris
Phvul.002G083600 2.0kb downstream 2.0kb downstream 4120 true Chr02: 13380201-13384320 Phaseolus vulgaris
Phvul.002G083600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13382321-13384320 Phaseolus vulgaris
Phvul.002G083600 5.0kb upstream 5.0kb upstream 7120 true Chr02: 13375201-13382320 Phaseolus vulgaris
Phvul.002G083600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13375201-13380200 Phaseolus vulgaris
Phvul.002G083600 5.0kb downstream 5.0kb downstream 7120 true Chr02: 13380201-13387320 Phaseolus vulgaris
Phvul.002G083600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13382321-13387320 Phaseolus vulgaris
Phvul.002G083600 10.0kb upstream 10.0kb upstream 12120 true Chr02: 13370201-13382320 Phaseolus vulgaris
Phvul.002G083600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13370201-13380200 Phaseolus vulgaris
Phvul.002G083600 10.0kb downstream 10.0kb downstream 12120 true Chr02: 13380201-13392320 Phaseolus vulgaris
Phvul.002G083600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13382321-13392320 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313944 5265 Fabidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.5 0.0 45.7804    
cufflinks 49.479 0.0 129.553 High  
cufflinks 32.9345 0.0 85.1957    
cufflinks 278.093 0.0 882.038 High High
cufflinks 39.0485 0.0 101.216 High  
cufflinks 11.1086 0.0 29.9273   Low
cufflinks 45.6727 0.0 119.345 High  
cufflinks 53.8256 0.0 141.94 High  
cufflinks 8.62631 0.0 23.7469   Low
cufflinks 291.644 0.0 938.224 High High
cufflinks 36.5578 0.0 94.6606 High  

0 Strain