Gene : Phvul.002G070500 P. vulgaris v2.1
Defline:  (1 of 6) K07937//K07977 - ADP-ribosylation factor 1 (ARF1) // Arf/Sar family, other (ARF) Genomic Order:  700
Name:  ? Phvul.002G070500 Secondary Identifier:  ? PAC:37178171
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G070500 0.5kb upstream 0.5kb upstream 3420 true Chr02: 9339987-9343406 Phaseolus vulgaris
Phvul.002G070500 0.5kb upstream 0.5kb upstream 500 false Chr02: 9339987-9340486 Phaseolus vulgaris
Phvul.002G070500 0.5kb downstream 0.5kb downstream 3420 true Chr02: 9340487-9343906 Phaseolus vulgaris
Phvul.002G070500 0.5kb downstream 0.5kb downstream 500 false Chr02: 9343407-9343906 Phaseolus vulgaris
Phvul.002G070500 1.0kb upstream 1.0kb upstream 3920 true Chr02: 9339487-9343406 Phaseolus vulgaris
Phvul.002G070500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9339487-9340486 Phaseolus vulgaris
Phvul.002G070500 1.0kb downstream 1.0kb downstream 3920 true Chr02: 9340487-9344406 Phaseolus vulgaris
Phvul.002G070500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9343407-9344406 Phaseolus vulgaris
Phvul.002G070500 2.0kb upstream 2.0kb upstream 4920 true Chr02: 9338487-9343406 Phaseolus vulgaris
Phvul.002G070500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9338487-9340486 Phaseolus vulgaris
Phvul.002G070500 2.0kb downstream 2.0kb downstream 4920 true Chr02: 9340487-9345406 Phaseolus vulgaris
Phvul.002G070500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9343407-9345406 Phaseolus vulgaris
Phvul.002G070500 5.0kb upstream 5.0kb upstream 7920 true Chr02: 9335487-9343406 Phaseolus vulgaris
Phvul.002G070500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9335487-9340486 Phaseolus vulgaris
Phvul.002G070500 5.0kb downstream 5.0kb downstream 7920 true Chr02: 9340487-9348406 Phaseolus vulgaris
Phvul.002G070500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9343407-9348406 Phaseolus vulgaris
Phvul.002G070500 10.0kb upstream 10.0kb upstream 12920 true Chr02: 9330487-9343406 Phaseolus vulgaris
Phvul.002G070500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9330487-9340486 Phaseolus vulgaris
Phvul.002G070500 10.0kb downstream 10.0kb downstream 12920 true Chr02: 9340487-9353406 Phaseolus vulgaris
Phvul.002G070500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9343407-9353406 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312447 5265 Fabidae View MSA
124074730 5270 Rosid View MSA
123752155 5271 Pentapetalae View MSA
122796047 5272 Eudicot View MSA
122049759 5273 Angiosperm View MSA
123429166 5275 Viridiplantae View MSA
121351098 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 188.203 0.0 533.556 High  
cufflinks 176.78 0.0 497.351 High  
cufflinks 146.057 0.0 402.512 High  
cufflinks 342.12 0.0 1046.1 High High
cufflinks 216.599 0.0 620.291 High  
cufflinks 149.895 0.0 413.894 High  
cufflinks 143.291 0.0 393.713 High  
cufflinks 142.82 0.0 392.116 High  
cufflinks 182.077 0.0 512.259 High  
cufflinks 179.263 0.0 505.08 High  
cufflinks 281.825 0.0 838.053 High High

0 Strain