Gene : Phvul.002G075400 P. vulgaris v2.1
Defline:  (1 of 1) KOG4308 - LRR-containing protein Genomic Order:  758
Name:  ? Phvul.002G075400 Secondary Identifier:  ? PAC:37175602
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G075400 0.5kb upstream 0.5kb upstream 16279 true Chr02: 11443962-11460240 Phaseolus vulgaris
Phvul.002G075400 0.5kb upstream 0.5kb upstream 500 false Chr02: 11459741-11460240 Phaseolus vulgaris
Phvul.002G075400 0.5kb downstream 0.5kb downstream 16279 true Chr02: 11443462-11459740 Phaseolus vulgaris
Phvul.002G075400 0.5kb downstream 0.5kb downstream 500 false Chr02: 11443462-11443961 Phaseolus vulgaris
Phvul.002G075400 1.0kb upstream 1.0kb upstream 16779 true Chr02: 11443962-11460740 Phaseolus vulgaris
Phvul.002G075400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11459741-11460740 Phaseolus vulgaris
Phvul.002G075400 1.0kb downstream 1.0kb downstream 16779 true Chr02: 11442962-11459740 Phaseolus vulgaris
Phvul.002G075400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11442962-11443961 Phaseolus vulgaris
Phvul.002G075400 2.0kb upstream 2.0kb upstream 17779 true Chr02: 11443962-11461740 Phaseolus vulgaris
Phvul.002G075400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11459741-11461740 Phaseolus vulgaris
Phvul.002G075400 2.0kb downstream 2.0kb downstream 17779 true Chr02: 11441962-11459740 Phaseolus vulgaris
Phvul.002G075400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11441962-11443961 Phaseolus vulgaris
Phvul.002G075400 5.0kb upstream 5.0kb upstream 20779 true Chr02: 11443962-11464740 Phaseolus vulgaris
Phvul.002G075400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11459741-11464740 Phaseolus vulgaris
Phvul.002G075400 5.0kb downstream 5.0kb downstream 20779 true Chr02: 11438962-11459740 Phaseolus vulgaris
Phvul.002G075400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11438962-11443961 Phaseolus vulgaris
Phvul.002G075400 10.0kb upstream 10.0kb upstream 25779 true Chr02: 11443962-11469740 Phaseolus vulgaris
Phvul.002G075400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11459741-11469740 Phaseolus vulgaris
Phvul.002G075400 10.0kb downstream 10.0kb downstream 25779 true Chr02: 11433962-11459740 Phaseolus vulgaris
Phvul.002G075400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11433962-11443961 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041184 5273 Angiosperm View MSA
122300349 5265 Fabidae View MSA
124060778 5270 Rosid View MSA
123736434 5271 Pentapetalae View MSA
122788762 5272 Eudicot View MSA
121345266 5274 Embryophyte View MSA
123427876 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.07696 0.0 23.455    
cufflinks 7.90624 0.0 33.9893    
cufflinks 20.7574 0.0 79.9049   High
cufflinks 5.96109 0.0 18.7768    
cufflinks 5.47351 0.0 17.4494    
cufflinks 13.3918 0.0 48.3054   High
cufflinks 4.681 0.0 18.0673    
cufflinks 6.39026 0.0 28.1379    
cufflinks 4.26525 0.0 19.1681    
cufflinks 7.33624 0.0 31.3902    
cufflinks 3.99728 0.0 16.0451   Low

0 Strain