Gene : Phvul.002G055200 P. vulgaris v2.1
Defline:  (1 of 13) PF05641 - Agenet domain (Agenet) Genomic Order:  550
Name:  ? Phvul.002G055200 Secondary Identifier:  ? PAC:37174871
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G055200 0.5kb upstream 0.5kb upstream 12293 true Chr02: 5004397-5016689 Phaseolus vulgaris
Phvul.002G055200 0.5kb upstream 0.5kb upstream 500 false Chr02: 5016190-5016689 Phaseolus vulgaris
Phvul.002G055200 0.5kb downstream 0.5kb downstream 12293 true Chr02: 5003897-5016189 Phaseolus vulgaris
Phvul.002G055200 0.5kb downstream 0.5kb downstream 500 false Chr02: 5003897-5004396 Phaseolus vulgaris
Phvul.002G055200 1.0kb upstream 1.0kb upstream 12793 true Chr02: 5004397-5017189 Phaseolus vulgaris
Phvul.002G055200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5016190-5017189 Phaseolus vulgaris
Phvul.002G055200 1.0kb downstream 1.0kb downstream 12793 true Chr02: 5003397-5016189 Phaseolus vulgaris
Phvul.002G055200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5003397-5004396 Phaseolus vulgaris
Phvul.002G055200 2.0kb upstream 2.0kb upstream 13793 true Chr02: 5004397-5018189 Phaseolus vulgaris
Phvul.002G055200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5016190-5018189 Phaseolus vulgaris
Phvul.002G055200 2.0kb downstream 2.0kb downstream 13793 true Chr02: 5002397-5016189 Phaseolus vulgaris
Phvul.002G055200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5002397-5004396 Phaseolus vulgaris
Phvul.002G055200 5.0kb upstream 5.0kb upstream 16793 true Chr02: 5004397-5021189 Phaseolus vulgaris
Phvul.002G055200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5016190-5021189 Phaseolus vulgaris
Phvul.002G055200 5.0kb downstream 5.0kb downstream 16793 true Chr02: 4999397-5016189 Phaseolus vulgaris
Phvul.002G055200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4999397-5004396 Phaseolus vulgaris
Phvul.002G055200 10.0kb upstream 10.0kb upstream 21793 true Chr02: 5004397-5026189 Phaseolus vulgaris
Phvul.002G055200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5016190-5026189 Phaseolus vulgaris
Phvul.002G055200 10.0kb downstream 10.0kb downstream 21793 true Chr02: 4994397-5016189 Phaseolus vulgaris
Phvul.002G055200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4994397-5004396 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299096 5265 Fabidae View MSA
124050504 5270 Rosid View MSA
123744023 5271 Pentapetalae View MSA
122793938 5272 Eudicot View MSA
122048804 5273 Angiosperm View MSA
121311119 5274 Embryophyte View MSA
123348460 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.6154 0.0 19.478   Low
cufflinks 6.2299 0.0 28.1422    
cufflinks 5.43153 0.0 25.1361    
cufflinks 3.59742 0.0 16.6794   Low
cufflinks 5.64718 0.0 26.7148    
cufflinks 6.09964 0.0 28.0598    
cufflinks 6.3172 0.0 24.522    
cufflinks 5.53822 0.0 28.7904    
cufflinks 5.67205 0.0 26.359    
cufflinks 8.11485 0.0 35.5285   High
cufflinks 6.29666 0.0 24.6562    

0 Strain