Gene : Phvul.002G054200 P. vulgaris v2.1
Defline:  (1 of 7) PF03007//PF06974 - Wax ester synthase-like Acyl-CoA acyltransferase domain (WES_acyltransf) // Protein of unknown function (DUF1298) (DUF1298) Genomic Order:  541
Name:  ? Phvul.002G054200 Secondary Identifier:  ? PAC:37174737
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G054200 0.5kb upstream 0.5kb upstream 3528 true Chr02: 4921411-4924938 Phaseolus vulgaris
Phvul.002G054200 0.5kb upstream 0.5kb upstream 500 false Chr02: 4924439-4924938 Phaseolus vulgaris
Phvul.002G054200 0.5kb downstream 0.5kb downstream 3528 true Chr02: 4920911-4924438 Phaseolus vulgaris
Phvul.002G054200 0.5kb downstream 0.5kb downstream 500 false Chr02: 4920911-4921410 Phaseolus vulgaris
Phvul.002G054200 1.0kb upstream 1.0kb upstream 4028 true Chr02: 4921411-4925438 Phaseolus vulgaris
Phvul.002G054200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4924439-4925438 Phaseolus vulgaris
Phvul.002G054200 1.0kb downstream 1.0kb downstream 4028 true Chr02: 4920411-4924438 Phaseolus vulgaris
Phvul.002G054200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4920411-4921410 Phaseolus vulgaris
Phvul.002G054200 2.0kb upstream 2.0kb upstream 5028 true Chr02: 4921411-4926438 Phaseolus vulgaris
Phvul.002G054200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4924439-4926438 Phaseolus vulgaris
Phvul.002G054200 2.0kb downstream 2.0kb downstream 5028 true Chr02: 4919411-4924438 Phaseolus vulgaris
Phvul.002G054200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4919411-4921410 Phaseolus vulgaris
Phvul.002G054200 5.0kb upstream 5.0kb upstream 8028 true Chr02: 4921411-4929438 Phaseolus vulgaris
Phvul.002G054200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4924439-4929438 Phaseolus vulgaris
Phvul.002G054200 5.0kb downstream 5.0kb downstream 8028 true Chr02: 4916411-4924438 Phaseolus vulgaris
Phvul.002G054200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4916411-4921410 Phaseolus vulgaris
Phvul.002G054200 10.0kb upstream 10.0kb upstream 13028 true Chr02: 4921411-4934438 Phaseolus vulgaris
Phvul.002G054200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4924439-4934438 Phaseolus vulgaris
Phvul.002G054200 10.0kb downstream 10.0kb downstream 13028 true Chr02: 4911411-4924438 Phaseolus vulgaris
Phvul.002G054200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4911411-4921410 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311081 5265 Fabidae View MSA
124072353 5270 Rosid View MSA
123749646 5271 Pentapetalae View MSA
122794217 5272 Eudicot View MSA
122046091 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121351027 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 108.173 0.0 311.721 High High
cufflinks 32.2469 0.0 83.8397    
cufflinks 29.4493 0.0 76.3148    
cufflinks 60.8539 0.0 164.663 High  
cufflinks 18.1771 0.0 47.1054   Low
cufflinks 25.8505 0.0 66.8826    
cufflinks 31.4385 0.0 81.876 High  
cufflinks 21.285 0.0 55.0178    
cufflinks 57.4549 0.0 155.461 High  
cufflinks 55.7498 0.0 149.645 High  
cufflinks 18.4459 0.0 47.7656   Low

0 Strain