Gene : Phvul.002G056100 P. vulgaris v2.1
Genomic Order:  560 Name:  ? Phvul.002G056100
Secondary Identifier:  ? PAC:37178772
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G056100 0.5kb upstream 0.5kb upstream 1372 true Chr02: 5823419-5824790 Phaseolus vulgaris
Phvul.002G056100 0.5kb upstream 0.5kb upstream 500 false Chr02: 5823419-5823918 Phaseolus vulgaris
Phvul.002G056100 0.5kb downstream 0.5kb downstream 1372 true Chr02: 5823919-5825290 Phaseolus vulgaris
Phvul.002G056100 0.5kb downstream 0.5kb downstream 500 false Chr02: 5824791-5825290 Phaseolus vulgaris
Phvul.002G056100 1.0kb upstream 1.0kb upstream 1872 true Chr02: 5822919-5824790 Phaseolus vulgaris
Phvul.002G056100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5822919-5823918 Phaseolus vulgaris
Phvul.002G056100 1.0kb downstream 1.0kb downstream 1872 true Chr02: 5823919-5825790 Phaseolus vulgaris
Phvul.002G056100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5824791-5825790 Phaseolus vulgaris
Phvul.002G056100 2.0kb upstream 2.0kb upstream 2872 true Chr02: 5821919-5824790 Phaseolus vulgaris
Phvul.002G056100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5821919-5823918 Phaseolus vulgaris
Phvul.002G056100 2.0kb downstream 2.0kb downstream 2872 true Chr02: 5823919-5826790 Phaseolus vulgaris
Phvul.002G056100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5824791-5826790 Phaseolus vulgaris
Phvul.002G056100 5.0kb upstream 5.0kb upstream 5872 true Chr02: 5818919-5824790 Phaseolus vulgaris
Phvul.002G056100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5818919-5823918 Phaseolus vulgaris
Phvul.002G056100 5.0kb downstream 5.0kb downstream 5872 true Chr02: 5823919-5829790 Phaseolus vulgaris
Phvul.002G056100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5824791-5829790 Phaseolus vulgaris
Phvul.002G056100 10.0kb upstream 10.0kb upstream 10872 true Chr02: 5813919-5824790 Phaseolus vulgaris
Phvul.002G056100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5813919-5823918 Phaseolus vulgaris
Phvul.002G056100 10.0kb downstream 10.0kb downstream 10872 true Chr02: 5823919-5834790 Phaseolus vulgaris
Phvul.002G056100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5824791-5834790 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310401 5265 Fabidae View MSA
124073839 5270 Rosid View MSA
123744072 5271 Pentapetalae View MSA
122770892 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6943 0.0 51.7536   High
cufflinks 3.59421 0.0 12.6241    
cufflinks 2.56105 0.0 9.24856   Low
cufflinks 10.0336 0.0 31.3043    
cufflinks 6.75474 0.0 22.1077    
cufflinks 3.15026 0.0 11.2093    
cufflinks 17.3984 0.0 51.1993   High
cufflinks 15.1746 0.0 45.3068    
cufflinks 19.4753 0.0 56.7618   High
cufflinks 1.64138 0.0 6.18294   Low
cufflinks 4.83937 0.0 16.5056    

0 Strain