Gene : Phvul.002G058200 P. vulgaris v2.1
Defline:  (1 of 74) PF00892 - EamA-like transporter family (EamA) Genomic Order:  581
Name:  ? Phvul.002G058200 Secondary Identifier:  ? PAC:37178616
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G058200 0.5kb upstream 0.5kb upstream 3890 true Chr02: 6188991-6192880 Phaseolus vulgaris
Phvul.002G058200 0.5kb upstream 0.5kb upstream 500 false Chr02: 6188991-6189490 Phaseolus vulgaris
Phvul.002G058200 0.5kb downstream 0.5kb downstream 3890 true Chr02: 6189491-6193380 Phaseolus vulgaris
Phvul.002G058200 0.5kb downstream 0.5kb downstream 500 false Chr02: 6192881-6193380 Phaseolus vulgaris
Phvul.002G058200 1.0kb upstream 1.0kb upstream 4390 true Chr02: 6188491-6192880 Phaseolus vulgaris
Phvul.002G058200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6188491-6189490 Phaseolus vulgaris
Phvul.002G058200 1.0kb downstream 1.0kb downstream 4390 true Chr02: 6189491-6193880 Phaseolus vulgaris
Phvul.002G058200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6192881-6193880 Phaseolus vulgaris
Phvul.002G058200 2.0kb upstream 2.0kb upstream 5390 true Chr02: 6187491-6192880 Phaseolus vulgaris
Phvul.002G058200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6187491-6189490 Phaseolus vulgaris
Phvul.002G058200 2.0kb downstream 2.0kb downstream 5390 true Chr02: 6189491-6194880 Phaseolus vulgaris
Phvul.002G058200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6192881-6194880 Phaseolus vulgaris
Phvul.002G058200 5.0kb upstream 5.0kb upstream 8390 true Chr02: 6184491-6192880 Phaseolus vulgaris
Phvul.002G058200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6184491-6189490 Phaseolus vulgaris
Phvul.002G058200 5.0kb downstream 5.0kb downstream 8390 true Chr02: 6189491-6197880 Phaseolus vulgaris
Phvul.002G058200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6192881-6197880 Phaseolus vulgaris
Phvul.002G058200 10.0kb upstream 10.0kb upstream 13390 true Chr02: 6179491-6192880 Phaseolus vulgaris
Phvul.002G058200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6179491-6189490 Phaseolus vulgaris
Phvul.002G058200 10.0kb downstream 10.0kb downstream 13390 true Chr02: 6189491-6202880 Phaseolus vulgaris
Phvul.002G058200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6192881-6202880 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296294 5265 Fabidae View MSA
124050201 5270 Rosid View MSA
123751388 5271 Pentapetalae View MSA
122794828 5272 Eudicot View MSA
122051256 5273 Angiosperm View MSA
121351883 5274 Embryophyte View MSA
123382389 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5506 0.0 35.5236    
cufflinks 6.92845 0.0 22.025    
cufflinks 26.5714 0.0 84.1853   High
cufflinks 15.1899 0.0 49.4596    
cufflinks 3.93064 0.0 14.256    
cufflinks 13.5971 0.0 44.1943    
cufflinks 0.359277 0.0 1.64121 Low Low
cufflinks 1.20005 0.0 5.67843    
cufflinks 0.317789 0.0 1.43819 Low Low
cufflinks 3.57965 0.0 13.2961    
cufflinks 4.28362 0.0 15.1008    

0 Strain