Gene : Phvul.002G048200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24326:SF294 - HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-RELATED Genomic Order:  483
Name:  ? Phvul.002G048200 Secondary Identifier:  ? PAC:37176360
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G048200 0.5kb upstream 0.5kb upstream 9563 true Chr02: 4488592-4498154 Phaseolus vulgaris
Phvul.002G048200 0.5kb upstream 0.5kb upstream 500 false Chr02: 4497655-4498154 Phaseolus vulgaris
Phvul.002G048200 0.5kb downstream 0.5kb downstream 9563 true Chr02: 4488092-4497654 Phaseolus vulgaris
Phvul.002G048200 0.5kb downstream 0.5kb downstream 500 false Chr02: 4488092-4488591 Phaseolus vulgaris
Phvul.002G048200 1.0kb upstream 1.0kb upstream 10063 true Chr02: 4488592-4498654 Phaseolus vulgaris
Phvul.002G048200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4497655-4498654 Phaseolus vulgaris
Phvul.002G048200 1.0kb downstream 1.0kb downstream 10063 true Chr02: 4487592-4497654 Phaseolus vulgaris
Phvul.002G048200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4487592-4488591 Phaseolus vulgaris
Phvul.002G048200 2.0kb upstream 2.0kb upstream 11063 true Chr02: 4488592-4499654 Phaseolus vulgaris
Phvul.002G048200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4497655-4499654 Phaseolus vulgaris
Phvul.002G048200 2.0kb downstream 2.0kb downstream 11063 true Chr02: 4486592-4497654 Phaseolus vulgaris
Phvul.002G048200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4486592-4488591 Phaseolus vulgaris
Phvul.002G048200 5.0kb upstream 5.0kb upstream 14063 true Chr02: 4488592-4502654 Phaseolus vulgaris
Phvul.002G048200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4497655-4502654 Phaseolus vulgaris
Phvul.002G048200 5.0kb downstream 5.0kb downstream 14063 true Chr02: 4483592-4497654 Phaseolus vulgaris
Phvul.002G048200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4483592-4488591 Phaseolus vulgaris
Phvul.002G048200 10.0kb upstream 10.0kb upstream 19063 true Chr02: 4488592-4507654 Phaseolus vulgaris
Phvul.002G048200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4497655-4507654 Phaseolus vulgaris
Phvul.002G048200 10.0kb downstream 10.0kb downstream 19063 true Chr02: 4478592-4497654 Phaseolus vulgaris
Phvul.002G048200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4478592-4488591 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304482 5265 Fabidae View MSA
124067525 5270 Rosid View MSA
123744207 5271 Pentapetalae View MSA
122795649 5272 Eudicot View MSA
122043712 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.43826 0.0 21.9018    
cufflinks 3.66482 0.0 14.0118    
cufflinks 1.12724 0.0 4.91259   Low
cufflinks 3.45002 0.0 11.4508    
cufflinks 7.32103 0.0 24.4006    
cufflinks 13.9001 0.0 43.8875   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 13.1247 0.0 41.5395   High

0 Strain