Gene : Phvul.002G052400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11785//PTHR11785:SF366 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  523
Name:  ? Phvul.002G052400 Secondary Identifier:  ? PAC:37176991
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G052400 0.5kb upstream 0.5kb upstream 2363 true Chr02: 4784935-4787297 Phaseolus vulgaris
Phvul.002G052400 0.5kb upstream 0.5kb upstream 500 false Chr02: 4784935-4785434 Phaseolus vulgaris
Phvul.002G052400 0.5kb downstream 0.5kb downstream 2363 true Chr02: 4785435-4787797 Phaseolus vulgaris
Phvul.002G052400 0.5kb downstream 0.5kb downstream 500 false Chr02: 4787298-4787797 Phaseolus vulgaris
Phvul.002G052400 1.0kb upstream 1.0kb upstream 2863 true Chr02: 4784435-4787297 Phaseolus vulgaris
Phvul.002G052400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4784435-4785434 Phaseolus vulgaris
Phvul.002G052400 1.0kb downstream 1.0kb downstream 2863 true Chr02: 4785435-4788297 Phaseolus vulgaris
Phvul.002G052400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4787298-4788297 Phaseolus vulgaris
Phvul.002G052400 2.0kb upstream 2.0kb upstream 3863 true Chr02: 4783435-4787297 Phaseolus vulgaris
Phvul.002G052400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4783435-4785434 Phaseolus vulgaris
Phvul.002G052400 2.0kb downstream 2.0kb downstream 3863 true Chr02: 4785435-4789297 Phaseolus vulgaris
Phvul.002G052400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4787298-4789297 Phaseolus vulgaris
Phvul.002G052400 5.0kb upstream 5.0kb upstream 6863 true Chr02: 4780435-4787297 Phaseolus vulgaris
Phvul.002G052400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4780435-4785434 Phaseolus vulgaris
Phvul.002G052400 5.0kb downstream 5.0kb downstream 6863 true Chr02: 4785435-4792297 Phaseolus vulgaris
Phvul.002G052400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4787298-4792297 Phaseolus vulgaris
Phvul.002G052400 10.0kb upstream 10.0kb upstream 11863 true Chr02: 4775435-4787297 Phaseolus vulgaris
Phvul.002G052400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4775435-4785434 Phaseolus vulgaris
Phvul.002G052400 10.0kb downstream 10.0kb downstream 11863 true Chr02: 4785435-4797297 Phaseolus vulgaris
Phvul.002G052400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4787298-4797297 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303318 5265 Fabidae View MSA
124068047 5270 Rosid View MSA
123738563 5271 Pentapetalae View MSA
122792232 5272 Eudicot View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1137 0.0 27.3854   High
cufflinks 6.02382 0.0 17.0886    
cufflinks 3.3125 0.0 10.0199    
cufflinks 13.1996 0.0 35.2093   High
cufflinks 5.60255 0.0 16.046    
cufflinks 2.28415 0.0 7.22408   Low
cufflinks 3.55405 0.0 10.6618    
cufflinks 2.5742 0.0 7.99416   Low
cufflinks 7.42498 0.0 20.7545    
cufflinks 8.11502 0.0 22.4248    
cufflinks 6.1293 0.0 17.3961    

0 Strain