Gene : Phvul.002G177600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF3 - AUXIN RESPONSE FACTOR 6 Genomic Order:  1755
Name:  ? Phvul.002G177600 Secondary Identifier:  ? PAC:37174441
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G177600 0.5kb upstream 0.5kb upstream 9541 true Chr02: 33688695-33698235 Phaseolus vulgaris
Phvul.002G177600 0.5kb upstream 0.5kb upstream 500 false Chr02: 33688695-33689194 Phaseolus vulgaris
Phvul.002G177600 0.5kb downstream 0.5kb downstream 9541 true Chr02: 33689195-33698735 Phaseolus vulgaris
Phvul.002G177600 0.5kb downstream 0.5kb downstream 500 false Chr02: 33698236-33698735 Phaseolus vulgaris
Phvul.002G177600 1.0kb upstream 1.0kb upstream 10041 true Chr02: 33688195-33698235 Phaseolus vulgaris
Phvul.002G177600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 33688195-33689194 Phaseolus vulgaris
Phvul.002G177600 1.0kb downstream 1.0kb downstream 10041 true Chr02: 33689195-33699235 Phaseolus vulgaris
Phvul.002G177600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 33698236-33699235 Phaseolus vulgaris
Phvul.002G177600 2.0kb upstream 2.0kb upstream 11041 true Chr02: 33687195-33698235 Phaseolus vulgaris
Phvul.002G177600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 33687195-33689194 Phaseolus vulgaris
Phvul.002G177600 2.0kb downstream 2.0kb downstream 11041 true Chr02: 33689195-33700235 Phaseolus vulgaris
Phvul.002G177600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 33698236-33700235 Phaseolus vulgaris
Phvul.002G177600 5.0kb upstream 5.0kb upstream 14041 true Chr02: 33684195-33698235 Phaseolus vulgaris
Phvul.002G177600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 33684195-33689194 Phaseolus vulgaris
Phvul.002G177600 5.0kb downstream 5.0kb downstream 14041 true Chr02: 33689195-33703235 Phaseolus vulgaris
Phvul.002G177600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 33698236-33703235 Phaseolus vulgaris
Phvul.002G177600 10.0kb upstream 10.0kb upstream 19041 true Chr02: 33679195-33698235 Phaseolus vulgaris
Phvul.002G177600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 33679195-33689194 Phaseolus vulgaris
Phvul.002G177600 10.0kb downstream 10.0kb downstream 19041 true Chr02: 33689195-33708235 Phaseolus vulgaris
Phvul.002G177600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 33698236-33708235 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297272 5265 Fabidae View MSA
124035968 5270 Rosid View MSA
123609403 5271 Pentapetalae View MSA
122644051 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4219 0.0 49.4191   Low
cufflinks 44.8054 0.0 147.754 High  
cufflinks 23.0096 0.0 76.9503    
cufflinks 19.338 0.0 62.714    
cufflinks 41.283 0.0 153.613 High  
cufflinks 22.9691 0.0 76.5698    
cufflinks 25.1607 0.0 85.3424    
cufflinks 13.5134 0.0 43.3142   Low
cufflinks 29.5485 0.0 102.417    
cufflinks 98.1217 0.0 411.464 High High
cufflinks 35.2231 0.0 126.36 High  

0 Strain