Gene : Phvul.002G161700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31071:SF9 - INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-LIKE PROTEIN Genomic Order:  1620
Name:  ? Phvul.002G161700 Secondary Identifier:  ? PAC:37177967
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G161700 0.5kb upstream 0.5kb upstream 4491 true Chr02: 31662352-31666842 Phaseolus vulgaris
Phvul.002G161700 0.5kb upstream 0.5kb upstream 500 false Chr02: 31662352-31662851 Phaseolus vulgaris
Phvul.002G161700 0.5kb downstream 0.5kb downstream 4491 true Chr02: 31662852-31667342 Phaseolus vulgaris
Phvul.002G161700 0.5kb downstream 0.5kb downstream 500 false Chr02: 31666843-31667342 Phaseolus vulgaris
Phvul.002G161700 1.0kb upstream 1.0kb upstream 4991 true Chr02: 31661852-31666842 Phaseolus vulgaris
Phvul.002G161700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 31661852-31662851 Phaseolus vulgaris
Phvul.002G161700 1.0kb downstream 1.0kb downstream 4991 true Chr02: 31662852-31667842 Phaseolus vulgaris
Phvul.002G161700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 31666843-31667842 Phaseolus vulgaris
Phvul.002G161700 2.0kb upstream 2.0kb upstream 5991 true Chr02: 31660852-31666842 Phaseolus vulgaris
Phvul.002G161700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 31660852-31662851 Phaseolus vulgaris
Phvul.002G161700 2.0kb downstream 2.0kb downstream 5991 true Chr02: 31662852-31668842 Phaseolus vulgaris
Phvul.002G161700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 31666843-31668842 Phaseolus vulgaris
Phvul.002G161700 5.0kb upstream 5.0kb upstream 8991 true Chr02: 31657852-31666842 Phaseolus vulgaris
Phvul.002G161700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 31657852-31662851 Phaseolus vulgaris
Phvul.002G161700 5.0kb downstream 5.0kb downstream 8991 true Chr02: 31662852-31671842 Phaseolus vulgaris
Phvul.002G161700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 31666843-31671842 Phaseolus vulgaris
Phvul.002G161700 10.0kb upstream 10.0kb upstream 13991 true Chr02: 31652852-31666842 Phaseolus vulgaris
Phvul.002G161700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 31652852-31662851 Phaseolus vulgaris
Phvul.002G161700 10.0kb downstream 10.0kb downstream 13991 true Chr02: 31662852-31676842 Phaseolus vulgaris
Phvul.002G161700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 31666843-31676842 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301898 5265 Fabidae View MSA
124072871 5270 Rosid View MSA
123736575 5271 Pentapetalae View MSA
122797498 5272 Eudicot View MSA
122044970 5273 Angiosperm View MSA
121310375 5274 Embryophyte View MSA
123347876 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.29531 0.0 9.09583   Low
cufflinks 6.36197 0.0 23.4484    
cufflinks 3.59905 0.0 12.8398    
cufflinks 2.55579 0.0 10.5707   Low
cufflinks 5.30849 0.0 22.4885    
cufflinks 5.68176 0.0 21.327    
cufflinks 5.29821 0.0 20.0796    
cufflinks 4.98847 0.0 18.8547    
cufflinks 4.53278 0.0 15.6345    
cufflinks 8.31095 0.0 29.3252   High
cufflinks 5.53749 0.0 18.4205    

0 Strain