Gene : Phvul.002G163000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Genomic Order:  1632
Name:  ? Phvul.002G163000 Secondary Identifier:  ? PAC:37177298
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G163000 0.5kb upstream 0.5kb upstream 3055 true Chr02: 31771348-31774402 Phaseolus vulgaris
Phvul.002G163000 0.5kb upstream 0.5kb upstream 500 false Chr02: 31771348-31771847 Phaseolus vulgaris
Phvul.002G163000 0.5kb downstream 0.5kb downstream 3055 true Chr02: 31771848-31774902 Phaseolus vulgaris
Phvul.002G163000 0.5kb downstream 0.5kb downstream 500 false Chr02: 31774403-31774902 Phaseolus vulgaris
Phvul.002G163000 1.0kb upstream 1.0kb upstream 3555 true Chr02: 31770848-31774402 Phaseolus vulgaris
Phvul.002G163000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 31770848-31771847 Phaseolus vulgaris
Phvul.002G163000 1.0kb downstream 1.0kb downstream 3555 true Chr02: 31771848-31775402 Phaseolus vulgaris
Phvul.002G163000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 31774403-31775402 Phaseolus vulgaris
Phvul.002G163000 2.0kb upstream 2.0kb upstream 4555 true Chr02: 31769848-31774402 Phaseolus vulgaris
Phvul.002G163000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 31769848-31771847 Phaseolus vulgaris
Phvul.002G163000 2.0kb downstream 2.0kb downstream 4555 true Chr02: 31771848-31776402 Phaseolus vulgaris
Phvul.002G163000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 31774403-31776402 Phaseolus vulgaris
Phvul.002G163000 5.0kb upstream 5.0kb upstream 7555 true Chr02: 31766848-31774402 Phaseolus vulgaris
Phvul.002G163000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 31766848-31771847 Phaseolus vulgaris
Phvul.002G163000 5.0kb downstream 5.0kb downstream 7555 true Chr02: 31771848-31779402 Phaseolus vulgaris
Phvul.002G163000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 31774403-31779402 Phaseolus vulgaris
Phvul.002G163000 10.0kb upstream 10.0kb upstream 12555 true Chr02: 31761848-31774402 Phaseolus vulgaris
Phvul.002G163000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 31761848-31771847 Phaseolus vulgaris
Phvul.002G163000 10.0kb downstream 10.0kb downstream 12555 true Chr02: 31771848-31784402 Phaseolus vulgaris
Phvul.002G163000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 31774403-31784402 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122251082 5265 Fabidae Singleton cluster - no MSA
124073525 5270 Rosid View MSA
123749217 5271 Pentapetalae View MSA
122792770 5272 Eudicot View MSA
122049779 5273 Angiosperm View MSA
121351769 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.49977 0.0 4.73789   High
cufflinks 0.0615198 0.0 0.260822 Low  
cufflinks 0.0465247 0.0 0.202777 Low  
cufflinks 0.979794 0.0 3.28021   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.084226 0.0 0.347383 Low  
cufflinks 0.0275224 0.0 0.125309 Low  
cufflinks 0.010079 0.0 0.0510323 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00719874 0.0 0.0385053 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain