Gene : Phvul.002G166500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10168:SF116 - GLUTAREDOXIN-C3 Genomic Order:  1667
Name:  ? Phvul.002G166500 Secondary Identifier:  ? PAC:37174877
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris THIOREDOX-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G166500 0.5kb upstream 0.5kb upstream 2137 true Chr02: 32119095-32121231 Phaseolus vulgaris
Phvul.002G166500 0.5kb upstream 0.5kb upstream 500 false Chr02: 32119095-32119594 Phaseolus vulgaris
Phvul.002G166500 0.5kb downstream 0.5kb downstream 2137 true Chr02: 32119595-32121731 Phaseolus vulgaris
Phvul.002G166500 0.5kb downstream 0.5kb downstream 500 false Chr02: 32121232-32121731 Phaseolus vulgaris
Phvul.002G166500 1.0kb upstream 1.0kb upstream 2637 true Chr02: 32118595-32121231 Phaseolus vulgaris
Phvul.002G166500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 32118595-32119594 Phaseolus vulgaris
Phvul.002G166500 1.0kb downstream 1.0kb downstream 2637 true Chr02: 32119595-32122231 Phaseolus vulgaris
Phvul.002G166500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 32121232-32122231 Phaseolus vulgaris
Phvul.002G166500 2.0kb upstream 2.0kb upstream 3637 true Chr02: 32117595-32121231 Phaseolus vulgaris
Phvul.002G166500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 32117595-32119594 Phaseolus vulgaris
Phvul.002G166500 2.0kb downstream 2.0kb downstream 3637 true Chr02: 32119595-32123231 Phaseolus vulgaris
Phvul.002G166500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 32121232-32123231 Phaseolus vulgaris
Phvul.002G166500 5.0kb upstream 5.0kb upstream 6637 true Chr02: 32114595-32121231 Phaseolus vulgaris
Phvul.002G166500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 32114595-32119594 Phaseolus vulgaris
Phvul.002G166500 5.0kb downstream 5.0kb downstream 6637 true Chr02: 32119595-32126231 Phaseolus vulgaris
Phvul.002G166500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32121232-32126231 Phaseolus vulgaris
Phvul.002G166500 10.0kb upstream 10.0kb upstream 11637 true Chr02: 32109595-32121231 Phaseolus vulgaris
Phvul.002G166500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 32109595-32119594 Phaseolus vulgaris
Phvul.002G166500 10.0kb downstream 10.0kb downstream 11637 true Chr02: 32119595-32131231 Phaseolus vulgaris
Phvul.002G166500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32121232-32131231 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297294 5265 Fabidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.853 0.0 44.1137   High
cufflinks 11.818 0.0 33.8254    
cufflinks 9.22175 0.0 27.0774    
cufflinks 22.6616 0.0 61.6086   High
cufflinks 7.73961 0.0 23.3296    
cufflinks 8.54803 0.0 25.3525    
cufflinks 9.70345 0.0 28.4542    
cufflinks 16.1984 0.0 44.9613   High
cufflinks 8.62615 0.0 25.7273    
cufflinks 6.0204 0.0 18.6016   Low
cufflinks 7.73043 0.0 23.2772    

0 Strain