Gene : Phvul.002G152800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  1532
Name:  ? Phvul.002G152800 Secondary Identifier:  ? PAC:37178864
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G152800 0.5kb upstream 0.5kb upstream 3711 true Chr02: 30632947-30636657 Phaseolus vulgaris
Phvul.002G152800 0.5kb upstream 0.5kb upstream 500 false Chr02: 30632947-30633446 Phaseolus vulgaris
Phvul.002G152800 0.5kb downstream 0.5kb downstream 3711 true Chr02: 30633447-30637157 Phaseolus vulgaris
Phvul.002G152800 0.5kb downstream 0.5kb downstream 500 false Chr02: 30636658-30637157 Phaseolus vulgaris
Phvul.002G152800 1.0kb upstream 1.0kb upstream 4211 true Chr02: 30632447-30636657 Phaseolus vulgaris
Phvul.002G152800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30632447-30633446 Phaseolus vulgaris
Phvul.002G152800 1.0kb downstream 1.0kb downstream 4211 true Chr02: 30633447-30637657 Phaseolus vulgaris
Phvul.002G152800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30636658-30637657 Phaseolus vulgaris
Phvul.002G152800 2.0kb upstream 2.0kb upstream 5211 true Chr02: 30631447-30636657 Phaseolus vulgaris
Phvul.002G152800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30631447-30633446 Phaseolus vulgaris
Phvul.002G152800 2.0kb downstream 2.0kb downstream 5211 true Chr02: 30633447-30638657 Phaseolus vulgaris
Phvul.002G152800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30636658-30638657 Phaseolus vulgaris
Phvul.002G152800 5.0kb upstream 5.0kb upstream 8211 true Chr02: 30628447-30636657 Phaseolus vulgaris
Phvul.002G152800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30628447-30633446 Phaseolus vulgaris
Phvul.002G152800 5.0kb downstream 5.0kb downstream 8211 true Chr02: 30633447-30641657 Phaseolus vulgaris
Phvul.002G152800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30636658-30641657 Phaseolus vulgaris
Phvul.002G152800 10.0kb upstream 10.0kb upstream 13211 true Chr02: 30623447-30636657 Phaseolus vulgaris
Phvul.002G152800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30623447-30633446 Phaseolus vulgaris
Phvul.002G152800 10.0kb downstream 10.0kb downstream 13211 true Chr02: 30633447-30646657 Phaseolus vulgaris
Phvul.002G152800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30636658-30646657 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312093 5265 Fabidae View MSA
124060834 5270 Rosid View MSA
123741079 5271 Pentapetalae View MSA
122790680 5272 Eudicot View MSA
122043689 5273 Angiosperm View MSA
121345999 5274 Embryophyte View MSA
123428179 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.17923 0.0 4.16029    
cufflinks 1.37638 0.0 4.78289    
cufflinks 92.1265 0.0 247.238 High High
cufflinks 2.17614 0.0 7.22052    
cufflinks 0.446804 0.0 1.72511 Low  
cufflinks 40.9469 0.0 105.858 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0226673 0.0 0.11477 Low Low
cufflinks 0.0351615 0.0 0.170785 Low Low
cufflinks 6.15701 0.0 18.0818    
cufflinks 0.323766 0.0 1.28044 Low  

0 Strain