Gene : Phvul.002G156400 P. vulgaris v2.1
Defline:  (1 of 5) PTHR22950:SF269 - EXPRESSED PROTEIN Genomic Order:  1568
Name:  ? Phvul.002G156400 Secondary Identifier:  ? PAC:37174455
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G156400 0.5kb upstream 0.5kb upstream 1520 true Chr02: 31111458-31112977 Phaseolus vulgaris
Phvul.002G156400 0.5kb upstream 0.5kb upstream 500 false Chr02: 31112478-31112977 Phaseolus vulgaris
Phvul.002G156400 0.5kb downstream 0.5kb downstream 1520 true Chr02: 31110958-31112477 Phaseolus vulgaris
Phvul.002G156400 0.5kb downstream 0.5kb downstream 500 false Chr02: 31110958-31111457 Phaseolus vulgaris
Phvul.002G156400 1.0kb upstream 1.0kb upstream 2020 true Chr02: 31111458-31113477 Phaseolus vulgaris
Phvul.002G156400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 31112478-31113477 Phaseolus vulgaris
Phvul.002G156400 1.0kb downstream 1.0kb downstream 2020 true Chr02: 31110458-31112477 Phaseolus vulgaris
Phvul.002G156400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 31110458-31111457 Phaseolus vulgaris
Phvul.002G156400 2.0kb upstream 2.0kb upstream 3020 true Chr02: 31111458-31114477 Phaseolus vulgaris
Phvul.002G156400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 31112478-31114477 Phaseolus vulgaris
Phvul.002G156400 2.0kb downstream 2.0kb downstream 3020 true Chr02: 31109458-31112477 Phaseolus vulgaris
Phvul.002G156400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 31109458-31111457 Phaseolus vulgaris
Phvul.002G156400 5.0kb upstream 5.0kb upstream 6020 true Chr02: 31111458-31117477 Phaseolus vulgaris
Phvul.002G156400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 31112478-31117477 Phaseolus vulgaris
Phvul.002G156400 5.0kb downstream 5.0kb downstream 6020 true Chr02: 31106458-31112477 Phaseolus vulgaris
Phvul.002G156400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 31106458-31111457 Phaseolus vulgaris
Phvul.002G156400 10.0kb upstream 10.0kb upstream 11020 true Chr02: 31111458-31122477 Phaseolus vulgaris
Phvul.002G156400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 31112478-31122477 Phaseolus vulgaris
Phvul.002G156400 10.0kb downstream 10.0kb downstream 11020 true Chr02: 31101458-31112477 Phaseolus vulgaris
Phvul.002G156400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 31101458-31111457 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315249 5265 Fabidae View MSA
124071448 5270 Rosid View MSA
123746493 5271 Pentapetalae View MSA
122771935 5272 Eudicot View MSA
122050905 5273 Angiosperm View MSA
121349854 5274 Embryophyte View MSA
123381472 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 13.0019 0.0 48.8593   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.71408 0.0 19.401    
cufflinks 3.35572 0.0 14.105    
cufflinks 1.41301 0.0 6.43342    
cufflinks 0.537798 0.0 2.723   Low
cufflinks 2.26884 0.0 9.85344    
cufflinks 2.57998 0.0 11.1967    
cufflinks 1.97528 0.0 8.73919    

0 Strain