Gene : Phvul.002G160000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11-2 Genomic Order:  1604
Name:  ? Phvul.002G160000 Secondary Identifier:  ? PAC:37177000
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G160000 0.5kb upstream 0.5kb upstream 3202 true Chr02: 31480060-31483261 Phaseolus vulgaris
Phvul.002G160000 0.5kb upstream 0.5kb upstream 500 false Chr02: 31482762-31483261 Phaseolus vulgaris
Phvul.002G160000 0.5kb downstream 0.5kb downstream 3202 true Chr02: 31479560-31482761 Phaseolus vulgaris
Phvul.002G160000 0.5kb downstream 0.5kb downstream 500 false Chr02: 31479560-31480059 Phaseolus vulgaris
Phvul.002G160000 1.0kb upstream 1.0kb upstream 3702 true Chr02: 31480060-31483761 Phaseolus vulgaris
Phvul.002G160000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 31482762-31483761 Phaseolus vulgaris
Phvul.002G160000 1.0kb downstream 1.0kb downstream 3702 true Chr02: 31479060-31482761 Phaseolus vulgaris
Phvul.002G160000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 31479060-31480059 Phaseolus vulgaris
Phvul.002G160000 2.0kb upstream 2.0kb upstream 4702 true Chr02: 31480060-31484761 Phaseolus vulgaris
Phvul.002G160000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 31482762-31484761 Phaseolus vulgaris
Phvul.002G160000 2.0kb downstream 2.0kb downstream 4702 true Chr02: 31478060-31482761 Phaseolus vulgaris
Phvul.002G160000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 31478060-31480059 Phaseolus vulgaris
Phvul.002G160000 5.0kb upstream 5.0kb upstream 7702 true Chr02: 31480060-31487761 Phaseolus vulgaris
Phvul.002G160000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 31482762-31487761 Phaseolus vulgaris
Phvul.002G160000 5.0kb downstream 5.0kb downstream 7702 true Chr02: 31475060-31482761 Phaseolus vulgaris
Phvul.002G160000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 31475060-31480059 Phaseolus vulgaris
Phvul.002G160000 10.0kb upstream 10.0kb upstream 12702 true Chr02: 31480060-31492761 Phaseolus vulgaris
Phvul.002G160000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 31482762-31492761 Phaseolus vulgaris
Phvul.002G160000 10.0kb downstream 10.0kb downstream 12702 true Chr02: 31470060-31482761 Phaseolus vulgaris
Phvul.002G160000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 31470060-31480059 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307802 5265 Fabidae View MSA
124065499 5270 Rosid View MSA
123749374 5271 Pentapetalae View MSA
122793256 5272 Eudicot View MSA
122044830 5273 Angiosperm View MSA
121350394 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033702 0.0 0.167027 Low Low
cufflinks 0.0630407 0.0 0.292244 Low  
cufflinks 0.0597201 0.0 0.278935 Low  
cufflinks 0.0610109 0.0 0.283404 Low  
cufflinks 0.0588672 0.0 0.276414 Low  
cufflinks 0.0438359 0.0 0.211355 Low  
cufflinks 0.153939 0.0 0.655385 Low High
cufflinks 0.0281425 0.0 0.142493 Low Low
cufflinks 0.0843229 0.0 0.381012 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain