Gene : Phvul.002G151400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  1518
Name:  ? Phvul.002G151400 Secondary Identifier:  ? PAC:37175462
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G151400 0.5kb upstream 0.5kb upstream 6743 true Chr02: 30474873-30481615 Phaseolus vulgaris
Phvul.002G151400 0.5kb upstream 0.5kb upstream 500 false Chr02: 30474873-30475372 Phaseolus vulgaris
Phvul.002G151400 0.5kb downstream 0.5kb downstream 6743 true Chr02: 30475373-30482115 Phaseolus vulgaris
Phvul.002G151400 0.5kb downstream 0.5kb downstream 500 false Chr02: 30481616-30482115 Phaseolus vulgaris
Phvul.002G151400 1.0kb upstream 1.0kb upstream 7243 true Chr02: 30474373-30481615 Phaseolus vulgaris
Phvul.002G151400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30474373-30475372 Phaseolus vulgaris
Phvul.002G151400 1.0kb downstream 1.0kb downstream 7243 true Chr02: 30475373-30482615 Phaseolus vulgaris
Phvul.002G151400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30481616-30482615 Phaseolus vulgaris
Phvul.002G151400 2.0kb upstream 2.0kb upstream 8243 true Chr02: 30473373-30481615 Phaseolus vulgaris
Phvul.002G151400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30473373-30475372 Phaseolus vulgaris
Phvul.002G151400 2.0kb downstream 2.0kb downstream 8243 true Chr02: 30475373-30483615 Phaseolus vulgaris
Phvul.002G151400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30481616-30483615 Phaseolus vulgaris
Phvul.002G151400 5.0kb upstream 5.0kb upstream 11243 true Chr02: 30470373-30481615 Phaseolus vulgaris
Phvul.002G151400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30470373-30475372 Phaseolus vulgaris
Phvul.002G151400 5.0kb downstream 5.0kb downstream 11243 true Chr02: 30475373-30486615 Phaseolus vulgaris
Phvul.002G151400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30481616-30486615 Phaseolus vulgaris
Phvul.002G151400 10.0kb upstream 10.0kb upstream 16243 true Chr02: 30465373-30481615 Phaseolus vulgaris
Phvul.002G151400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30465373-30475372 Phaseolus vulgaris
Phvul.002G151400 10.0kb downstream 10.0kb downstream 16243 true Chr02: 30475373-30491615 Phaseolus vulgaris
Phvul.002G151400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30481616-30491615 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313551 5265 Fabidae View MSA
124064515 5270 Rosid View MSA
123741380 5271 Pentapetalae View MSA
122789129 5272 Eudicot View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.7827 0.0 139.041 High  
cufflinks 37.2849 0.0 97.3022 High  
cufflinks 106.98 0.0 280.767 High High
cufflinks 53.2137 0.0 137.584 High  
cufflinks 38.084 0.0 99.353 High  
cufflinks 76.628 0.0 198.655 High High
cufflinks 12.3163 0.0 34.9347   Low
cufflinks 12.1666 0.0 34.5682   Low
cufflinks 16.2524 0.0 45.0426   Low
cufflinks 29.3583 0.0 77.6332    
cufflinks 28.9145 0.0 76.5605    

0 Strain