Gene : Phvul.002G152200 P. vulgaris v2.1
Defline:  (1 of 2) K14270 - aminotransferase (ACS10_12) Genomic Order:  1526
Name:  ? Phvul.002G152200 Secondary Identifier:  ? PAC:37177550
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ETHYL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-7270 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G152200 0.5kb upstream 0.5kb upstream 4252 true Chr02: 30588084-30592335 Phaseolus vulgaris
Phvul.002G152200 0.5kb upstream 0.5kb upstream 500 false Chr02: 30591836-30592335 Phaseolus vulgaris
Phvul.002G152200 0.5kb downstream 0.5kb downstream 4252 true Chr02: 30587584-30591835 Phaseolus vulgaris
Phvul.002G152200 0.5kb downstream 0.5kb downstream 500 false Chr02: 30587584-30588083 Phaseolus vulgaris
Phvul.002G152200 1.0kb upstream 1.0kb upstream 4752 true Chr02: 30588084-30592835 Phaseolus vulgaris
Phvul.002G152200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30591836-30592835 Phaseolus vulgaris
Phvul.002G152200 1.0kb downstream 1.0kb downstream 4752 true Chr02: 30587084-30591835 Phaseolus vulgaris
Phvul.002G152200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30587084-30588083 Phaseolus vulgaris
Phvul.002G152200 2.0kb upstream 2.0kb upstream 5752 true Chr02: 30588084-30593835 Phaseolus vulgaris
Phvul.002G152200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30591836-30593835 Phaseolus vulgaris
Phvul.002G152200 2.0kb downstream 2.0kb downstream 5752 true Chr02: 30586084-30591835 Phaseolus vulgaris
Phvul.002G152200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30586084-30588083 Phaseolus vulgaris
Phvul.002G152200 5.0kb upstream 5.0kb upstream 8752 true Chr02: 30588084-30596835 Phaseolus vulgaris
Phvul.002G152200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30591836-30596835 Phaseolus vulgaris
Phvul.002G152200 5.0kb downstream 5.0kb downstream 8752 true Chr02: 30583084-30591835 Phaseolus vulgaris
Phvul.002G152200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30583084-30588083 Phaseolus vulgaris
Phvul.002G152200 10.0kb upstream 10.0kb upstream 13752 true Chr02: 30588084-30601835 Phaseolus vulgaris
Phvul.002G152200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30591836-30601835 Phaseolus vulgaris
Phvul.002G152200 10.0kb downstream 10.0kb downstream 13752 true Chr02: 30578084-30591835 Phaseolus vulgaris
Phvul.002G152200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30578084-30588083 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314101 5265 Fabidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.1768 0.0 121.668 High High
cufflinks 4.94912 0.0 13.7414    
cufflinks 34.0425 0.0 89.7782   High
cufflinks 1.90152 0.0 5.88523    
cufflinks 3.13187 0.0 9.14528    
cufflinks 7.75515 0.0 20.7153    
cufflinks 0.234058 0.0 0.890754 Low Low
cufflinks 0.493316 0.0 1.75397    
cufflinks 0.0163842 0.0 0.0795804 Low Low
cufflinks 27.6864 0.0 72.1293    
cufflinks 3.10143 0.0 9.05799    

0 Strain