Gene : Phvul.002G139400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24221:SF138 - LP14331P-RELATED Genomic Order:  1392
Name:  ? Phvul.002G139400 Secondary Identifier:  ? PAC:37175519
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G139400 0.5kb upstream 0.5kb upstream 8044 true Chr02: 28508574-28516617 Phaseolus vulgaris
Phvul.002G139400 0.5kb upstream 0.5kb upstream 500 false Chr02: 28508574-28509073 Phaseolus vulgaris
Phvul.002G139400 0.5kb downstream 0.5kb downstream 8044 true Chr02: 28509074-28517117 Phaseolus vulgaris
Phvul.002G139400 0.5kb downstream 0.5kb downstream 500 false Chr02: 28516618-28517117 Phaseolus vulgaris
Phvul.002G139400 1.0kb upstream 1.0kb upstream 8544 true Chr02: 28508074-28516617 Phaseolus vulgaris
Phvul.002G139400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28508074-28509073 Phaseolus vulgaris
Phvul.002G139400 1.0kb downstream 1.0kb downstream 8544 true Chr02: 28509074-28517617 Phaseolus vulgaris
Phvul.002G139400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28516618-28517617 Phaseolus vulgaris
Phvul.002G139400 2.0kb upstream 2.0kb upstream 9544 true Chr02: 28507074-28516617 Phaseolus vulgaris
Phvul.002G139400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28507074-28509073 Phaseolus vulgaris
Phvul.002G139400 2.0kb downstream 2.0kb downstream 9544 true Chr02: 28509074-28518617 Phaseolus vulgaris
Phvul.002G139400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28516618-28518617 Phaseolus vulgaris
Phvul.002G139400 5.0kb upstream 5.0kb upstream 12544 true Chr02: 28504074-28516617 Phaseolus vulgaris
Phvul.002G139400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28504074-28509073 Phaseolus vulgaris
Phvul.002G139400 5.0kb downstream 5.0kb downstream 12544 true Chr02: 28509074-28521617 Phaseolus vulgaris
Phvul.002G139400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28516618-28521617 Phaseolus vulgaris
Phvul.002G139400 10.0kb upstream 10.0kb upstream 17544 true Chr02: 28499074-28516617 Phaseolus vulgaris
Phvul.002G139400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28499074-28509073 Phaseolus vulgaris
Phvul.002G139400 10.0kb downstream 10.0kb downstream 17544 true Chr02: 28509074-28526617 Phaseolus vulgaris
Phvul.002G139400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28516618-28526617 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299273 5265 Fabidae View MSA
124067084 5270 Rosid View MSA
123740508 5271 Pentapetalae View MSA
122789191 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.36136 0.0 9.1629    
cufflinks 4.89797 0.0 12.9715    
cufflinks 38.702 0.0 108.728 High  
cufflinks 15.4248 0.0 40.0884    
cufflinks 6.93394 0.0 18.0849    
cufflinks 32.2264 0.0 88.678    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.026903 0.0 0.116838 Low Low
cufflinks 2.45514 0.0 6.89998    
cufflinks 8.43888 0.0 21.8632    

0 Strain