Gene : Phvul.002G140600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31065:SF2 - PLATZ TRANSCRIPTION FACTOR DOMAIN-CONTAINING PROTEIN Genomic Order:  1404
Name:  ? Phvul.002G140600 Secondary Identifier:  ? PAC:37177523
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G140600 0.5kb upstream 0.5kb upstream 3076 true Chr02: 28682469-28685544 Phaseolus vulgaris
Phvul.002G140600 0.5kb upstream 0.5kb upstream 500 false Chr02: 28685045-28685544 Phaseolus vulgaris
Phvul.002G140600 0.5kb downstream 0.5kb downstream 3076 true Chr02: 28681969-28685044 Phaseolus vulgaris
Phvul.002G140600 0.5kb downstream 0.5kb downstream 500 false Chr02: 28681969-28682468 Phaseolus vulgaris
Phvul.002G140600 1.0kb upstream 1.0kb upstream 3576 true Chr02: 28682469-28686044 Phaseolus vulgaris
Phvul.002G140600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28685045-28686044 Phaseolus vulgaris
Phvul.002G140600 1.0kb downstream 1.0kb downstream 3576 true Chr02: 28681469-28685044 Phaseolus vulgaris
Phvul.002G140600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28681469-28682468 Phaseolus vulgaris
Phvul.002G140600 2.0kb upstream 2.0kb upstream 4576 true Chr02: 28682469-28687044 Phaseolus vulgaris
Phvul.002G140600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28685045-28687044 Phaseolus vulgaris
Phvul.002G140600 2.0kb downstream 2.0kb downstream 4576 true Chr02: 28680469-28685044 Phaseolus vulgaris
Phvul.002G140600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28680469-28682468 Phaseolus vulgaris
Phvul.002G140600 5.0kb upstream 5.0kb upstream 7576 true Chr02: 28682469-28690044 Phaseolus vulgaris
Phvul.002G140600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28685045-28690044 Phaseolus vulgaris
Phvul.002G140600 5.0kb downstream 5.0kb downstream 7576 true Chr02: 28677469-28685044 Phaseolus vulgaris
Phvul.002G140600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28677469-28682468 Phaseolus vulgaris
Phvul.002G140600 10.0kb upstream 10.0kb upstream 12576 true Chr02: 28682469-28695044 Phaseolus vulgaris
Phvul.002G140600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28685045-28695044 Phaseolus vulgaris
Phvul.002G140600 10.0kb downstream 10.0kb downstream 12576 true Chr02: 28672469-28685044 Phaseolus vulgaris
Phvul.002G140600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28672469-28682468 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314113 5265 Fabidae View MSA
124073027 5270 Rosid View MSA
123750243 5271 Pentapetalae View MSA
122790111 5272 Eudicot View MSA
122049805 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 242.712 0.0 753.035 High High
cufflinks 44.1761 0.0 115.038 High  
cufflinks 14.0945 0.0 37.3364   Low
cufflinks 72.8032 0.0 195.556 High  
cufflinks 43.6636 0.0 113.466 High  
cufflinks 15.1522 0.0 39.958   Low
cufflinks 54.533 0.0 143.932 High  
cufflinks 33.348 0.0 86.3139 High  
cufflinks 65.2221 0.0 174.415 High  
cufflinks 90.6618 0.0 247.736 High  
cufflinks 51.0467 0.0 133.576 High  

0 Strain