Gene : Phvul.002G140300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR14155//PTHR14155:SF87 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  1401
Name:  ? Phvul.002G140300 Secondary Identifier:  ? PAC:37176196
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G140300 0.5kb upstream 0.5kb upstream 1790 true Chr02: 28641872-28643661 Phaseolus vulgaris
Phvul.002G140300 0.5kb upstream 0.5kb upstream 500 false Chr02: 28643162-28643661 Phaseolus vulgaris
Phvul.002G140300 0.5kb downstream 0.5kb downstream 1790 true Chr02: 28641372-28643161 Phaseolus vulgaris
Phvul.002G140300 0.5kb downstream 0.5kb downstream 500 false Chr02: 28641372-28641871 Phaseolus vulgaris
Phvul.002G140300 1.0kb upstream 1.0kb upstream 2290 true Chr02: 28641872-28644161 Phaseolus vulgaris
Phvul.002G140300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28643162-28644161 Phaseolus vulgaris
Phvul.002G140300 1.0kb downstream 1.0kb downstream 2290 true Chr02: 28640872-28643161 Phaseolus vulgaris
Phvul.002G140300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28640872-28641871 Phaseolus vulgaris
Phvul.002G140300 2.0kb upstream 2.0kb upstream 3290 true Chr02: 28641872-28645161 Phaseolus vulgaris
Phvul.002G140300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28643162-28645161 Phaseolus vulgaris
Phvul.002G140300 2.0kb downstream 2.0kb downstream 3290 true Chr02: 28639872-28643161 Phaseolus vulgaris
Phvul.002G140300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28639872-28641871 Phaseolus vulgaris
Phvul.002G140300 5.0kb upstream 5.0kb upstream 6290 true Chr02: 28641872-28648161 Phaseolus vulgaris
Phvul.002G140300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28643162-28648161 Phaseolus vulgaris
Phvul.002G140300 5.0kb downstream 5.0kb downstream 6290 true Chr02: 28636872-28643161 Phaseolus vulgaris
Phvul.002G140300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28636872-28641871 Phaseolus vulgaris
Phvul.002G140300 10.0kb upstream 10.0kb upstream 11290 true Chr02: 28641872-28653161 Phaseolus vulgaris
Phvul.002G140300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28643162-28653161 Phaseolus vulgaris
Phvul.002G140300 10.0kb downstream 10.0kb downstream 11290 true Chr02: 28631872-28643161 Phaseolus vulgaris
Phvul.002G140300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28631872-28641871 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307508 5265 Fabidae View MSA
124072575 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.87399 0.0 6.2499    
cufflinks 2.85881 0.0 9.09168    
cufflinks 1.78765 0.0 5.98503    
cufflinks 2.71097 0.0 8.72944    
cufflinks 9.24166 0.0 25.9737   High
cufflinks 3.39335 0.0 10.5776    
cufflinks 6.85399 0.0 19.7118    
cufflinks 2.32286 0.0 7.54156    
cufflinks 5.9231 0.0 17.3457    
cufflinks 0.691001 0.0 2.55375   Low
cufflinks 8.47958 0.0 23.9898   High

0 Strain