Gene : Phvul.002G141300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24006:SF470 - PROTEIN Y71A12B.15 Genomic Order:  1411
Name:  ? Phvul.002G141300 Secondary Identifier:  ? PAC:37174580
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G141300 0.5kb upstream 0.5kb upstream 4959 true Chr02: 28792346-28797304 Phaseolus vulgaris
Phvul.002G141300 0.5kb upstream 0.5kb upstream 500 false Chr02: 28796805-28797304 Phaseolus vulgaris
Phvul.002G141300 0.5kb downstream 0.5kb downstream 4959 true Chr02: 28791846-28796804 Phaseolus vulgaris
Phvul.002G141300 0.5kb downstream 0.5kb downstream 500 false Chr02: 28791846-28792345 Phaseolus vulgaris
Phvul.002G141300 1.0kb upstream 1.0kb upstream 5459 true Chr02: 28792346-28797804 Phaseolus vulgaris
Phvul.002G141300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28796805-28797804 Phaseolus vulgaris
Phvul.002G141300 1.0kb downstream 1.0kb downstream 5459 true Chr02: 28791346-28796804 Phaseolus vulgaris
Phvul.002G141300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28791346-28792345 Phaseolus vulgaris
Phvul.002G141300 2.0kb upstream 2.0kb upstream 6459 true Chr02: 28792346-28798804 Phaseolus vulgaris
Phvul.002G141300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28796805-28798804 Phaseolus vulgaris
Phvul.002G141300 2.0kb downstream 2.0kb downstream 6459 true Chr02: 28790346-28796804 Phaseolus vulgaris
Phvul.002G141300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28790346-28792345 Phaseolus vulgaris
Phvul.002G141300 5.0kb upstream 5.0kb upstream 9459 true Chr02: 28792346-28801804 Phaseolus vulgaris
Phvul.002G141300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28796805-28801804 Phaseolus vulgaris
Phvul.002G141300 5.0kb downstream 5.0kb downstream 9459 true Chr02: 28787346-28796804 Phaseolus vulgaris
Phvul.002G141300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28787346-28792345 Phaseolus vulgaris
Phvul.002G141300 10.0kb upstream 10.0kb upstream 14459 true Chr02: 28792346-28806804 Phaseolus vulgaris
Phvul.002G141300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28796805-28806804 Phaseolus vulgaris
Phvul.002G141300 10.0kb downstream 10.0kb downstream 14459 true Chr02: 28782346-28796804 Phaseolus vulgaris
Phvul.002G141300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28782346-28792345 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306271 5265 Fabidae View MSA
124064624 5270 Rosid View MSA
123747010 5271 Pentapetalae View MSA
122793778 5272 Eudicot View MSA
122046494 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.33227 0.0 22.3363    
cufflinks 10.569 0.0 35.7034    
cufflinks 6.69352 0.0 24.4585    
cufflinks 5.75659 0.0 18.3753   Low
cufflinks 8.96148 0.0 30.7975    
cufflinks 8.31075 0.0 29.1893    
cufflinks 9.93189 0.0 33.7108    
cufflinks 10.3788 0.0 34.9733    
cufflinks 12.4146 0.0 40.9492   High
cufflinks 5.13477 0.0 19.6701   Low
cufflinks 7.90301 0.0 23.9831    

0 Strain