Gene : Phvul.002G142000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR34190:SF3 - MICROSPORE-SPECIFIC PROMOTER 2 Genomic Order:  1418
Name:  ? Phvul.002G142000 Secondary Identifier:  ? PAC:37177726
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G142000 0.5kb upstream 0.5kb upstream 2780 true Chr02: 28878707-28881486 Phaseolus vulgaris
Phvul.002G142000 0.5kb upstream 0.5kb upstream 500 false Chr02: 28880987-28881486 Phaseolus vulgaris
Phvul.002G142000 0.5kb downstream 0.5kb downstream 2780 true Chr02: 28878207-28880986 Phaseolus vulgaris
Phvul.002G142000 0.5kb downstream 0.5kb downstream 500 false Chr02: 28878207-28878706 Phaseolus vulgaris
Phvul.002G142000 1.0kb upstream 1.0kb upstream 3280 true Chr02: 28878707-28881986 Phaseolus vulgaris
Phvul.002G142000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28880987-28881986 Phaseolus vulgaris
Phvul.002G142000 1.0kb downstream 1.0kb downstream 3280 true Chr02: 28877707-28880986 Phaseolus vulgaris
Phvul.002G142000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28877707-28878706 Phaseolus vulgaris
Phvul.002G142000 2.0kb upstream 2.0kb upstream 4280 true Chr02: 28878707-28882986 Phaseolus vulgaris
Phvul.002G142000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28880987-28882986 Phaseolus vulgaris
Phvul.002G142000 2.0kb downstream 2.0kb downstream 4280 true Chr02: 28876707-28880986 Phaseolus vulgaris
Phvul.002G142000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28876707-28878706 Phaseolus vulgaris
Phvul.002G142000 5.0kb upstream 5.0kb upstream 7280 true Chr02: 28878707-28885986 Phaseolus vulgaris
Phvul.002G142000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28880987-28885986 Phaseolus vulgaris
Phvul.002G142000 5.0kb downstream 5.0kb downstream 7280 true Chr02: 28873707-28880986 Phaseolus vulgaris
Phvul.002G142000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28873707-28878706 Phaseolus vulgaris
Phvul.002G142000 10.0kb upstream 10.0kb upstream 12280 true Chr02: 28878707-28890986 Phaseolus vulgaris
Phvul.002G142000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28880987-28890986 Phaseolus vulgaris
Phvul.002G142000 10.0kb downstream 10.0kb downstream 12280 true Chr02: 28868707-28880986 Phaseolus vulgaris
Phvul.002G142000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28868707-28878706 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791974 5273 Angiosperm View MSA
122299029 5265 Fabidae View MSA
124068285 5270 Rosid View MSA
123748958 5271 Pentapetalae View MSA
122795694 5272 Eudicot View MSA
121063238 5274 Embryophyte View MSA
123103002 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.0662 0.0 4.04891   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.193919 0.0 0.848318 Low  
cufflinks 0.138482 0.0 0.623708 Low  
cufflinks 0.346908 0.0 1.43892 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain