Gene : Phvul.002G127900 P. vulgaris v2.1
Defline:  (1 of 3) K02873 - large subunit ribosomal protein L13e (RP-L13e, RPL13) Genomic Order:  1280
Name:  ? Phvul.002G127900 Secondary Identifier:  ? PAC:37176877
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G127900 0.5kb upstream 0.5kb upstream 2758 true Chr02: 27022003-27024760 Phaseolus vulgaris
Phvul.002G127900 0.5kb upstream 0.5kb upstream 500 false Chr02: 27024261-27024760 Phaseolus vulgaris
Phvul.002G127900 0.5kb downstream 0.5kb downstream 2758 true Chr02: 27021503-27024260 Phaseolus vulgaris
Phvul.002G127900 0.5kb downstream 0.5kb downstream 500 false Chr02: 27021503-27022002 Phaseolus vulgaris
Phvul.002G127900 1.0kb upstream 1.0kb upstream 3258 true Chr02: 27022003-27025260 Phaseolus vulgaris
Phvul.002G127900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27024261-27025260 Phaseolus vulgaris
Phvul.002G127900 1.0kb downstream 1.0kb downstream 3258 true Chr02: 27021003-27024260 Phaseolus vulgaris
Phvul.002G127900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27021003-27022002 Phaseolus vulgaris
Phvul.002G127900 2.0kb upstream 2.0kb upstream 4258 true Chr02: 27022003-27026260 Phaseolus vulgaris
Phvul.002G127900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27024261-27026260 Phaseolus vulgaris
Phvul.002G127900 2.0kb downstream 2.0kb downstream 4258 true Chr02: 27020003-27024260 Phaseolus vulgaris
Phvul.002G127900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27020003-27022002 Phaseolus vulgaris
Phvul.002G127900 5.0kb upstream 5.0kb upstream 7258 true Chr02: 27022003-27029260 Phaseolus vulgaris
Phvul.002G127900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27024261-27029260 Phaseolus vulgaris
Phvul.002G127900 5.0kb downstream 5.0kb downstream 7258 true Chr02: 27017003-27024260 Phaseolus vulgaris
Phvul.002G127900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27017003-27022002 Phaseolus vulgaris
Phvul.002G127900 10.0kb upstream 10.0kb upstream 12258 true Chr02: 27022003-27034260 Phaseolus vulgaris
Phvul.002G127900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27024261-27034260 Phaseolus vulgaris
Phvul.002G127900 10.0kb downstream 10.0kb downstream 12258 true Chr02: 27012003-27024260 Phaseolus vulgaris
Phvul.002G127900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27012003-27022002 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310849 5265 Fabidae View MSA
124069609 5270 Rosid View MSA
123744377 5271 Pentapetalae View MSA
122791356 5272 Eudicot View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 144.014 0.0 394.772 High  
cufflinks 204.293 0.0 582.84 High High
cufflinks 93.6008 0.0 248.133 High Low
cufflinks 233.729 0.0 678.378 High High
cufflinks 134.345 0.0 365.224 High  
cufflinks 106.297 0.0 284.422 High  
cufflinks 128.398 0.0 349.974 High  
cufflinks 158.543 0.0 440.267 High  
cufflinks 200.499 0.0 573.984 High High
cufflinks 67.9696 0.0 176.746 High Low
cufflinks 149.685 0.0 411.502 High  

0 Strain