Gene : Phvul.002G131600 P. vulgaris v2.1
Defline:  (1 of 2) PF11947 - Protein of unknown function (DUF3464) (DUF3464) Genomic Order:  1318
Name:  ? Phvul.002G131600 Secondary Identifier:  ? PAC:37176811
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G131600 0.5kb upstream 0.5kb upstream 1857 true Chr02: 27562989-27564845 Phaseolus vulgaris
Phvul.002G131600 0.5kb upstream 0.5kb upstream 500 false Chr02: 27564346-27564845 Phaseolus vulgaris
Phvul.002G131600 0.5kb downstream 0.5kb downstream 1857 true Chr02: 27562489-27564345 Phaseolus vulgaris
Phvul.002G131600 0.5kb downstream 0.5kb downstream 500 false Chr02: 27562489-27562988 Phaseolus vulgaris
Phvul.002G131600 1.0kb upstream 1.0kb upstream 2357 true Chr02: 27562989-27565345 Phaseolus vulgaris
Phvul.002G131600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27564346-27565345 Phaseolus vulgaris
Phvul.002G131600 1.0kb downstream 1.0kb downstream 2357 true Chr02: 27561989-27564345 Phaseolus vulgaris
Phvul.002G131600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27561989-27562988 Phaseolus vulgaris
Phvul.002G131600 2.0kb upstream 2.0kb upstream 3357 true Chr02: 27562989-27566345 Phaseolus vulgaris
Phvul.002G131600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27564346-27566345 Phaseolus vulgaris
Phvul.002G131600 2.0kb downstream 2.0kb downstream 3357 true Chr02: 27560989-27564345 Phaseolus vulgaris
Phvul.002G131600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27560989-27562988 Phaseolus vulgaris
Phvul.002G131600 5.0kb upstream 5.0kb upstream 6357 true Chr02: 27562989-27569345 Phaseolus vulgaris
Phvul.002G131600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27564346-27569345 Phaseolus vulgaris
Phvul.002G131600 5.0kb downstream 5.0kb downstream 6357 true Chr02: 27557989-27564345 Phaseolus vulgaris
Phvul.002G131600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27557989-27562988 Phaseolus vulgaris
Phvul.002G131600 10.0kb upstream 10.0kb upstream 11357 true Chr02: 27562989-27574345 Phaseolus vulgaris
Phvul.002G131600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27564346-27574345 Phaseolus vulgaris
Phvul.002G131600 10.0kb downstream 10.0kb downstream 11357 true Chr02: 27552989-27564345 Phaseolus vulgaris
Phvul.002G131600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27552989-27562988 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304779 5265 Fabidae View MSA
124067911 5270 Rosid View MSA
123738639 5271 Pentapetalae View MSA
122792645 5272 Eudicot View MSA
122046649 5273 Angiosperm View MSA
121348094 5274 Embryophyte View MSA
123428537 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.77801 0.0 25.649    
cufflinks 20.4945 0.0 55.4844    
cufflinks 75.222 0.0 195.504 High High
cufflinks 6.01116 0.0 18.5192    
cufflinks 10.7864 0.0 31.1411    
cufflinks 31.0042 0.0 81.4056   High
cufflinks 0.633006 0.0 2.43468   Low
cufflinks 1.57761 0.0 5.58595    
cufflinks 0.641998 0.0 2.46895   Low
cufflinks 7.14879 0.0 21.5381    
cufflinks 7.93207 0.0 23.6843    

0 Strain