Gene : Phvul.002G125000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10663//PTHR10663:SF147 - GUANYL-NUCLEOTIDE EXCHANGE FACTOR // SUBFAMILY NOT NAMED Genomic Order:  1250
Name:  ? Phvul.002G125000 Secondary Identifier:  ? PAC:37178736
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G125000 0.5kb upstream 0.5kb upstream 5276 true Chr02: 26390882-26396157 Phaseolus vulgaris
Phvul.002G125000 0.5kb upstream 0.5kb upstream 500 false Chr02: 26395658-26396157 Phaseolus vulgaris
Phvul.002G125000 0.5kb downstream 0.5kb downstream 5276 true Chr02: 26390382-26395657 Phaseolus vulgaris
Phvul.002G125000 0.5kb downstream 0.5kb downstream 500 false Chr02: 26390382-26390881 Phaseolus vulgaris
Phvul.002G125000 1.0kb upstream 1.0kb upstream 5776 true Chr02: 26390882-26396657 Phaseolus vulgaris
Phvul.002G125000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 26395658-26396657 Phaseolus vulgaris
Phvul.002G125000 1.0kb downstream 1.0kb downstream 5776 true Chr02: 26389882-26395657 Phaseolus vulgaris
Phvul.002G125000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 26389882-26390881 Phaseolus vulgaris
Phvul.002G125000 2.0kb upstream 2.0kb upstream 6776 true Chr02: 26390882-26397657 Phaseolus vulgaris
Phvul.002G125000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 26395658-26397657 Phaseolus vulgaris
Phvul.002G125000 2.0kb downstream 2.0kb downstream 6776 true Chr02: 26388882-26395657 Phaseolus vulgaris
Phvul.002G125000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 26388882-26390881 Phaseolus vulgaris
Phvul.002G125000 5.0kb upstream 5.0kb upstream 9776 true Chr02: 26390882-26400657 Phaseolus vulgaris
Phvul.002G125000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 26395658-26400657 Phaseolus vulgaris
Phvul.002G125000 5.0kb downstream 5.0kb downstream 9776 true Chr02: 26385882-26395657 Phaseolus vulgaris
Phvul.002G125000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 26385882-26390881 Phaseolus vulgaris
Phvul.002G125000 10.0kb upstream 10.0kb upstream 14776 true Chr02: 26390882-26405657 Phaseolus vulgaris
Phvul.002G125000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 26395658-26405657 Phaseolus vulgaris
Phvul.002G125000 10.0kb downstream 10.0kb downstream 14776 true Chr02: 26380882-26395657 Phaseolus vulgaris
Phvul.002G125000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 26380882-26390881 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304105 5265 Fabidae View MSA
124070510 5270 Rosid View MSA
123748367 5271 Pentapetalae View MSA
122794432 5272 Eudicot View MSA
122043052 5273 Angiosperm View MSA
121310069 5274 Embryophyte View MSA
123347662 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.78475 0.0 25.2425    
cufflinks 5.16214 0.0 18.249    
cufflinks 4.53506 0.0 16.4362   Low
cufflinks 5.89574 0.0 20.5086    
cufflinks 6.02909 0.0 21.0958    
cufflinks 3.8487 0.0 14.8934   Low
cufflinks 8.70847 0.0 31.8829   High
cufflinks 6.76375 0.0 25.9249    
cufflinks 5.64344 0.0 19.6684    
cufflinks 9.46285 0.0 29.6459   High
cufflinks 6.23941 0.0 21.4011    

0 Strain