Gene : Phvul.002G240600 P. vulgaris v2.1
Defline:  (1 of 2) PF02620 - Uncharacterized ACR, COG1399 (DUF177) Genomic Order:  2373
Name:  ? Phvul.002G240600 Secondary Identifier:  ? PAC:37175345
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G240600 0.5kb upstream 0.5kb upstream 4702 true Chr02: 41261092-41265793 Phaseolus vulgaris
Phvul.002G240600 0.5kb upstream 0.5kb upstream 500 false Chr02: 41261092-41261591 Phaseolus vulgaris
Phvul.002G240600 0.5kb downstream 0.5kb downstream 4702 true Chr02: 41261592-41266293 Phaseolus vulgaris
Phvul.002G240600 0.5kb downstream 0.5kb downstream 500 false Chr02: 41265794-41266293 Phaseolus vulgaris
Phvul.002G240600 1.0kb upstream 1.0kb upstream 5202 true Chr02: 41260592-41265793 Phaseolus vulgaris
Phvul.002G240600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41260592-41261591 Phaseolus vulgaris
Phvul.002G240600 1.0kb downstream 1.0kb downstream 5202 true Chr02: 41261592-41266793 Phaseolus vulgaris
Phvul.002G240600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41265794-41266793 Phaseolus vulgaris
Phvul.002G240600 2.0kb upstream 2.0kb upstream 6202 true Chr02: 41259592-41265793 Phaseolus vulgaris
Phvul.002G240600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41259592-41261591 Phaseolus vulgaris
Phvul.002G240600 2.0kb downstream 2.0kb downstream 6202 true Chr02: 41261592-41267793 Phaseolus vulgaris
Phvul.002G240600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41265794-41267793 Phaseolus vulgaris
Phvul.002G240600 5.0kb upstream 5.0kb upstream 9202 true Chr02: 41256592-41265793 Phaseolus vulgaris
Phvul.002G240600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41256592-41261591 Phaseolus vulgaris
Phvul.002G240600 5.0kb downstream 5.0kb downstream 9202 true Chr02: 41261592-41270793 Phaseolus vulgaris
Phvul.002G240600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41265794-41270793 Phaseolus vulgaris
Phvul.002G240600 10.0kb upstream 10.0kb upstream 14202 true Chr02: 41251592-41265793 Phaseolus vulgaris
Phvul.002G240600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41251592-41261591 Phaseolus vulgaris
Phvul.002G240600 10.0kb downstream 10.0kb downstream 14202 true Chr02: 41261592-41275793 Phaseolus vulgaris
Phvul.002G240600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41265794-41275793 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302199 5265 Fabidae View MSA
124062626 5270 Rosid View MSA
123736683 5271 Pentapetalae View MSA
122787330 5272 Eudicot View MSA
122051135 5273 Angiosperm View MSA
121345181 5274 Embryophyte View MSA
123380171 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.87447 0.0 22.1533    
cufflinks 5.45196 0.0 16.0306    
cufflinks 14.8845 0.0 39.7283   High
cufflinks 5.79294 0.0 17.0707    
cufflinks 3.81441 0.0 11.7907    
cufflinks 10.9586 0.0 30.0576   High
cufflinks 2.38195 0.0 7.71674   Low
cufflinks 2.70507 0.0 8.58526    
cufflinks 1.66215 0.0 5.62857   Low
cufflinks 5.09047 0.0 15.0969    
cufflinks 3.25996 0.0 10.2497    

0 Strain