Gene : Phvul.002G241900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33057:SF10 - OVATE FAMILY PROTEIN 5 Genomic Order:  2387
Name:  ? Phvul.002G241900 Secondary Identifier:  ? PAC:37178387
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G241900 0.5kb upstream 0.5kb upstream 1987 true Chr02: 41397912-41399898 Phaseolus vulgaris
Phvul.002G241900 0.5kb upstream 0.5kb upstream 500 false Chr02: 41397912-41398411 Phaseolus vulgaris
Phvul.002G241900 0.5kb downstream 0.5kb downstream 1987 true Chr02: 41398412-41400398 Phaseolus vulgaris
Phvul.002G241900 0.5kb downstream 0.5kb downstream 500 false Chr02: 41399899-41400398 Phaseolus vulgaris
Phvul.002G241900 1.0kb upstream 1.0kb upstream 2487 true Chr02: 41397412-41399898 Phaseolus vulgaris
Phvul.002G241900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41397412-41398411 Phaseolus vulgaris
Phvul.002G241900 1.0kb downstream 1.0kb downstream 2487 true Chr02: 41398412-41400898 Phaseolus vulgaris
Phvul.002G241900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41399899-41400898 Phaseolus vulgaris
Phvul.002G241900 2.0kb upstream 2.0kb upstream 3487 true Chr02: 41396412-41399898 Phaseolus vulgaris
Phvul.002G241900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41396412-41398411 Phaseolus vulgaris
Phvul.002G241900 2.0kb downstream 2.0kb downstream 3487 true Chr02: 41398412-41401898 Phaseolus vulgaris
Phvul.002G241900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41399899-41401898 Phaseolus vulgaris
Phvul.002G241900 5.0kb upstream 5.0kb upstream 6487 true Chr02: 41393412-41399898 Phaseolus vulgaris
Phvul.002G241900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41393412-41398411 Phaseolus vulgaris
Phvul.002G241900 5.0kb downstream 5.0kb downstream 6487 true Chr02: 41398412-41404898 Phaseolus vulgaris
Phvul.002G241900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41399899-41404898 Phaseolus vulgaris
Phvul.002G241900 10.0kb upstream 10.0kb upstream 11487 true Chr02: 41388412-41399898 Phaseolus vulgaris
Phvul.002G241900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41388412-41398411 Phaseolus vulgaris
Phvul.002G241900 10.0kb downstream 10.0kb downstream 11487 true Chr02: 41398412-41409898 Phaseolus vulgaris
Phvul.002G241900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41399899-41409898 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305616 5265 Fabidae View MSA
124050737 5270 Rosid View MSA
123750394 5271 Pentapetalae View MSA
122789866 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.524686 0.0 1.93525    
cufflinks 0.6523 0.0 2.35773    
cufflinks 1.57999 0.0 5.1777   High
cufflinks 0.604569 0.0 2.21944    
cufflinks 0.556353 0.0 2.06081 Low  
cufflinks 1.51793 0.0 5.00636   High
cufflinks 0.683904 0.0 2.45201    
cufflinks 0.30658 0.0 1.17366 Low Low
cufflinks 0.416429 0.0 1.56007 Low Low
cufflinks 1.13151 0.0 3.88265    
cufflinks 0.71141 0.0 2.56397    

0 Strain