Gene : Phvul.002G232300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11132//PTHR11132:SF124 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED Genomic Order:  2304
Name:  ? Phvul.002G232300 Secondary Identifier:  ? PAC:37176004
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G232300 0.5kb upstream 0.5kb upstream 5574 true Chr02: 40498614-40504187 Phaseolus vulgaris
Phvul.002G232300 0.5kb upstream 0.5kb upstream 500 false Chr02: 40503688-40504187 Phaseolus vulgaris
Phvul.002G232300 0.5kb downstream 0.5kb downstream 5574 true Chr02: 40498114-40503687 Phaseolus vulgaris
Phvul.002G232300 0.5kb downstream 0.5kb downstream 500 false Chr02: 40498114-40498613 Phaseolus vulgaris
Phvul.002G232300 1.0kb upstream 1.0kb upstream 6074 true Chr02: 40498614-40504687 Phaseolus vulgaris
Phvul.002G232300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40503688-40504687 Phaseolus vulgaris
Phvul.002G232300 1.0kb downstream 1.0kb downstream 6074 true Chr02: 40497614-40503687 Phaseolus vulgaris
Phvul.002G232300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40497614-40498613 Phaseolus vulgaris
Phvul.002G232300 2.0kb upstream 2.0kb upstream 7074 true Chr02: 40498614-40505687 Phaseolus vulgaris
Phvul.002G232300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40503688-40505687 Phaseolus vulgaris
Phvul.002G232300 2.0kb downstream 2.0kb downstream 7074 true Chr02: 40496614-40503687 Phaseolus vulgaris
Phvul.002G232300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40496614-40498613 Phaseolus vulgaris
Phvul.002G232300 5.0kb upstream 5.0kb upstream 10074 true Chr02: 40498614-40508687 Phaseolus vulgaris
Phvul.002G232300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40503688-40508687 Phaseolus vulgaris
Phvul.002G232300 5.0kb downstream 5.0kb downstream 10074 true Chr02: 40493614-40503687 Phaseolus vulgaris
Phvul.002G232300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40493614-40498613 Phaseolus vulgaris
Phvul.002G232300 10.0kb upstream 10.0kb upstream 15074 true Chr02: 40498614-40513687 Phaseolus vulgaris
Phvul.002G232300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40503688-40513687 Phaseolus vulgaris
Phvul.002G232300 10.0kb downstream 10.0kb downstream 15074 true Chr02: 40488614-40503687 Phaseolus vulgaris
Phvul.002G232300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40488614-40498613 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302319 5265 Fabidae View MSA
124071506 5270 Rosid View MSA
123745071 5271 Pentapetalae View MSA
122795336 5272 Eudicot View MSA
122048188 5273 Angiosperm View MSA
121351419 5274 Embryophyte View MSA
123427296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 256.918 0.0 822.273 High  
cufflinks 312.989 0.0 1040.6 High  
cufflinks 1645.81 0.0 8380.13 High High
cufflinks 284.309 0.0 935.689 High  
cufflinks 296.573 0.0 981.746 High  
cufflinks 465.183 0.0 1686.58 High  
cufflinks 11.603 0.0 30.9025   Low
cufflinks 10.5398 0.0 28.3529   Low
cufflinks 16.6791 0.0 43.5295   Low
cufflinks 168.407 0.0 504.006 High  
cufflinks 219.851 0.0 688.112 High  

0 Strain