Gene : Phvul.002G236600 P. vulgaris v2.1
Defline:  (1 of 4) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase Genomic Order:  2334
Name:  ? Phvul.002G236600 Secondary Identifier:  ? PAC:37175558
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5098 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6927 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G236600 0.5kb upstream 0.5kb upstream 7572 true Chr02: 40765696-40773267 Phaseolus vulgaris
Phvul.002G236600 0.5kb upstream 0.5kb upstream 500 false Chr02: 40772768-40773267 Phaseolus vulgaris
Phvul.002G236600 0.5kb downstream 0.5kb downstream 7572 true Chr02: 40765196-40772767 Phaseolus vulgaris
Phvul.002G236600 0.5kb downstream 0.5kb downstream 500 false Chr02: 40765196-40765695 Phaseolus vulgaris
Phvul.002G236600 1.0kb upstream 1.0kb upstream 8072 true Chr02: 40765696-40773767 Phaseolus vulgaris
Phvul.002G236600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40772768-40773767 Phaseolus vulgaris
Phvul.002G236600 1.0kb downstream 1.0kb downstream 8072 true Chr02: 40764696-40772767 Phaseolus vulgaris
Phvul.002G236600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40764696-40765695 Phaseolus vulgaris
Phvul.002G236600 2.0kb upstream 2.0kb upstream 9072 true Chr02: 40765696-40774767 Phaseolus vulgaris
Phvul.002G236600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40772768-40774767 Phaseolus vulgaris
Phvul.002G236600 2.0kb downstream 2.0kb downstream 9072 true Chr02: 40763696-40772767 Phaseolus vulgaris
Phvul.002G236600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40763696-40765695 Phaseolus vulgaris
Phvul.002G236600 5.0kb upstream 5.0kb upstream 12072 true Chr02: 40765696-40777767 Phaseolus vulgaris
Phvul.002G236600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40772768-40777767 Phaseolus vulgaris
Phvul.002G236600 5.0kb downstream 5.0kb downstream 12072 true Chr02: 40760696-40772767 Phaseolus vulgaris
Phvul.002G236600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40760696-40765695 Phaseolus vulgaris
Phvul.002G236600 10.0kb upstream 10.0kb upstream 17072 true Chr02: 40765696-40782767 Phaseolus vulgaris
Phvul.002G236600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40772768-40782767 Phaseolus vulgaris
Phvul.002G236600 10.0kb downstream 10.0kb downstream 17072 true Chr02: 40755696-40772767 Phaseolus vulgaris
Phvul.002G236600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40755696-40765695 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308383 5265 Fabidae View MSA
124064980 5270 Rosid View MSA
123746425 5271 Pentapetalae View MSA
122797838 5272 Eudicot View MSA
122045189 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121347962 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3338 0.0 53.1833    
cufflinks 15.984 0.0 52.1181    
cufflinks 46.8413 0.0 160.826 High High
cufflinks 15.3731 0.0 51.2473    
cufflinks 8.48985 0.0 26.1601    
cufflinks 19.4716 0.0 54.2309    
cufflinks 2.26155 0.0 7.3331    
cufflinks 0.631583 0.0 3.9075   Low
cufflinks 0.952615 0.0 5.34894   Low
cufflinks 16.6972 0.0 54.6131    
cufflinks 11.9155 0.0 40.3101    

0 Strain