Gene : Phvul.002G236500 P. vulgaris v2.1
Genomic Order:  2333 Name:  ? Phvul.002G236500
Secondary Identifier:  ? PAC:37178596
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G236500 0.5kb upstream 0.5kb upstream 2222 true Chr02: 40761459-40763680 Phaseolus vulgaris
Phvul.002G236500 0.5kb upstream 0.5kb upstream 500 false Chr02: 40763181-40763680 Phaseolus vulgaris
Phvul.002G236500 0.5kb downstream 0.5kb downstream 2222 true Chr02: 40760959-40763180 Phaseolus vulgaris
Phvul.002G236500 0.5kb downstream 0.5kb downstream 500 false Chr02: 40760959-40761458 Phaseolus vulgaris
Phvul.002G236500 1.0kb upstream 1.0kb upstream 2722 true Chr02: 40761459-40764180 Phaseolus vulgaris
Phvul.002G236500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40763181-40764180 Phaseolus vulgaris
Phvul.002G236500 1.0kb downstream 1.0kb downstream 2722 true Chr02: 40760459-40763180 Phaseolus vulgaris
Phvul.002G236500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40760459-40761458 Phaseolus vulgaris
Phvul.002G236500 2.0kb upstream 2.0kb upstream 3722 true Chr02: 40761459-40765180 Phaseolus vulgaris
Phvul.002G236500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40763181-40765180 Phaseolus vulgaris
Phvul.002G236500 2.0kb downstream 2.0kb downstream 3722 true Chr02: 40759459-40763180 Phaseolus vulgaris
Phvul.002G236500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40759459-40761458 Phaseolus vulgaris
Phvul.002G236500 5.0kb upstream 5.0kb upstream 6722 true Chr02: 40761459-40768180 Phaseolus vulgaris
Phvul.002G236500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40763181-40768180 Phaseolus vulgaris
Phvul.002G236500 5.0kb downstream 5.0kb downstream 6722 true Chr02: 40756459-40763180 Phaseolus vulgaris
Phvul.002G236500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40756459-40761458 Phaseolus vulgaris
Phvul.002G236500 10.0kb upstream 10.0kb upstream 11722 true Chr02: 40761459-40773180 Phaseolus vulgaris
Phvul.002G236500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40763181-40773180 Phaseolus vulgaris
Phvul.002G236500 10.0kb downstream 10.0kb downstream 11722 true Chr02: 40751459-40763180 Phaseolus vulgaris
Phvul.002G236500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40751459-40761458 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041169 5273 Angiosperm View MSA
122302638 5265 Fabidae View MSA
124062588 5270 Rosid View MSA
123745625 5271 Pentapetalae View MSA
122788144 5272 Eudicot View MSA
121348418 5274 Embryophyte View MSA
123380857 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2564 0.0 37.2425   Low
cufflinks 30.0042 0.0 77.7455    
cufflinks 23.3519 0.0 60.3649    
cufflinks 40.9943 0.0 107.459 High High
cufflinks 34.5865 0.0 90.1266 High  
cufflinks 26.2552 0.0 67.8896    
cufflinks 19.7954 0.0 51.2077    
cufflinks 14.2506 0.0 37.2564   Low
cufflinks 25.0738 0.0 64.8224    
cufflinks 22.7922 0.0 58.9151    
cufflinks 55.2219 0.0 148.123 High High

0 Strain