Gene : Phvul.002G237000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31250:SF4 - CALMODULIN-BINDING FAMILY PROTEIN-RELATED Genomic Order:  2338
Name:  ? Phvul.002G237000 Secondary Identifier:  ? PAC:37177662
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G237000 0.5kb upstream 0.5kb upstream 3574 true Chr02: 40800311-40803884 Phaseolus vulgaris
Phvul.002G237000 0.5kb upstream 0.5kb upstream 500 false Chr02: 40803385-40803884 Phaseolus vulgaris
Phvul.002G237000 0.5kb downstream 0.5kb downstream 3574 true Chr02: 40799811-40803384 Phaseolus vulgaris
Phvul.002G237000 0.5kb downstream 0.5kb downstream 500 false Chr02: 40799811-40800310 Phaseolus vulgaris
Phvul.002G237000 1.0kb upstream 1.0kb upstream 4074 true Chr02: 40800311-40804384 Phaseolus vulgaris
Phvul.002G237000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40803385-40804384 Phaseolus vulgaris
Phvul.002G237000 1.0kb downstream 1.0kb downstream 4074 true Chr02: 40799311-40803384 Phaseolus vulgaris
Phvul.002G237000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40799311-40800310 Phaseolus vulgaris
Phvul.002G237000 2.0kb upstream 2.0kb upstream 5074 true Chr02: 40800311-40805384 Phaseolus vulgaris
Phvul.002G237000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40803385-40805384 Phaseolus vulgaris
Phvul.002G237000 2.0kb downstream 2.0kb downstream 5074 true Chr02: 40798311-40803384 Phaseolus vulgaris
Phvul.002G237000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40798311-40800310 Phaseolus vulgaris
Phvul.002G237000 5.0kb upstream 5.0kb upstream 8074 true Chr02: 40800311-40808384 Phaseolus vulgaris
Phvul.002G237000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40803385-40808384 Phaseolus vulgaris
Phvul.002G237000 5.0kb downstream 5.0kb downstream 8074 true Chr02: 40795311-40803384 Phaseolus vulgaris
Phvul.002G237000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40795311-40800310 Phaseolus vulgaris
Phvul.002G237000 10.0kb upstream 10.0kb upstream 13074 true Chr02: 40800311-40813384 Phaseolus vulgaris
Phvul.002G237000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40803385-40813384 Phaseolus vulgaris
Phvul.002G237000 10.0kb downstream 10.0kb downstream 13074 true Chr02: 40790311-40803384 Phaseolus vulgaris
Phvul.002G237000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40790311-40800310 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300580 5265 Fabidae View MSA
124062345 5270 Rosid View MSA
123742026 5271 Pentapetalae View MSA
122795644 5272 Eudicot View MSA
122045965 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.27977 0.0 1.05482 Low Low
cufflinks 0.528244 0.0 1.8811    
cufflinks 0.977359 0.0 3.24448    
cufflinks 0.885191 0.0 3.00236    
cufflinks 0.516747 0.0 1.85761 Low  
cufflinks 0.914201 0.0 3.0651    
cufflinks 1.95542 0.0 6.01085   High
cufflinks 1.59464 0.0 5.00049    
cufflinks 3.59358 0.0 10.3155   High
cufflinks 0.477103 0.0 1.71945    
cufflinks 0.997759 0.0 3.33658    

0 Strain