Gene : Phvul.002G237200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10527//PTHR10527:SF29 - IMPORTIN BETA // SUBFAMILY NOT NAMED Genomic Order:  2340
Name:  ? Phvul.002G237200 Secondary Identifier:  ? PAC:37178502
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G237200 0.5kb upstream 0.5kb upstream 9441 true Chr02: 40841701-40851141 Phaseolus vulgaris
Phvul.002G237200 0.5kb upstream 0.5kb upstream 500 false Chr02: 40841701-40842200 Phaseolus vulgaris
Phvul.002G237200 0.5kb downstream 0.5kb downstream 9441 true Chr02: 40842201-40851641 Phaseolus vulgaris
Phvul.002G237200 0.5kb downstream 0.5kb downstream 500 false Chr02: 40851142-40851641 Phaseolus vulgaris
Phvul.002G237200 1.0kb upstream 1.0kb upstream 9941 true Chr02: 40841201-40851141 Phaseolus vulgaris
Phvul.002G237200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40841201-40842200 Phaseolus vulgaris
Phvul.002G237200 1.0kb downstream 1.0kb downstream 9941 true Chr02: 40842201-40852141 Phaseolus vulgaris
Phvul.002G237200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40851142-40852141 Phaseolus vulgaris
Phvul.002G237200 2.0kb upstream 2.0kb upstream 10941 true Chr02: 40840201-40851141 Phaseolus vulgaris
Phvul.002G237200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40840201-40842200 Phaseolus vulgaris
Phvul.002G237200 2.0kb downstream 2.0kb downstream 10941 true Chr02: 40842201-40853141 Phaseolus vulgaris
Phvul.002G237200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40851142-40853141 Phaseolus vulgaris
Phvul.002G237200 5.0kb upstream 5.0kb upstream 13941 true Chr02: 40837201-40851141 Phaseolus vulgaris
Phvul.002G237200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40837201-40842200 Phaseolus vulgaris
Phvul.002G237200 5.0kb downstream 5.0kb downstream 13941 true Chr02: 40842201-40856141 Phaseolus vulgaris
Phvul.002G237200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40851142-40856141 Phaseolus vulgaris
Phvul.002G237200 10.0kb upstream 10.0kb upstream 18941 true Chr02: 40832201-40851141 Phaseolus vulgaris
Phvul.002G237200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40832201-40842200 Phaseolus vulgaris
Phvul.002G237200 10.0kb downstream 10.0kb downstream 18941 true Chr02: 40842201-40861141 Phaseolus vulgaris
Phvul.002G237200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40851142-40861141 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302052 5265 Fabidae View MSA
124071324 5270 Rosid View MSA
123743954 5271 Pentapetalae View MSA
122786465 5272 Eudicot View MSA
122043271 5273 Angiosperm View MSA
121344814 5274 Embryophyte View MSA
123426355 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5453 0.0 37.861   Low
cufflinks 29.6715 0.0 81.0374    
cufflinks 34.0852 0.0 94.3368    
cufflinks 20.466 0.0 54.1828   Low
cufflinks 45.5322 0.0 130.214 High High
cufflinks 23.0729 0.0 61.65    
cufflinks 34.4915 0.0 95.7977 High  
cufflinks 28.6833 0.0 78.0936 High  
cufflinks 48.1402 0.0 138.672 High High
cufflinks 46.4153 0.0 133.089 High High
cufflinks 36.2291 0.0 100.812 High  

0 Strain