Gene : Phvul.002G226100 P. vulgaris v2.1
Defline:  (1 of 41) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  2236
Name:  ? Phvul.002G226100 Secondary Identifier:  ? PAC:37174596
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G226100 0.5kb upstream 0.5kb upstream 2311 true Chr02: 39760216-39762526 Phaseolus vulgaris
Phvul.002G226100 0.5kb upstream 0.5kb upstream 500 false Chr02: 39762027-39762526 Phaseolus vulgaris
Phvul.002G226100 0.5kb downstream 0.5kb downstream 2311 true Chr02: 39759716-39762026 Phaseolus vulgaris
Phvul.002G226100 0.5kb downstream 0.5kb downstream 500 false Chr02: 39759716-39760215 Phaseolus vulgaris
Phvul.002G226100 1.0kb upstream 1.0kb upstream 2811 true Chr02: 39760216-39763026 Phaseolus vulgaris
Phvul.002G226100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39762027-39763026 Phaseolus vulgaris
Phvul.002G226100 1.0kb downstream 1.0kb downstream 2811 true Chr02: 39759216-39762026 Phaseolus vulgaris
Phvul.002G226100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39759216-39760215 Phaseolus vulgaris
Phvul.002G226100 2.0kb upstream 2.0kb upstream 3811 true Chr02: 39760216-39764026 Phaseolus vulgaris
Phvul.002G226100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39762027-39764026 Phaseolus vulgaris
Phvul.002G226100 2.0kb downstream 2.0kb downstream 3811 true Chr02: 39758216-39762026 Phaseolus vulgaris
Phvul.002G226100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39758216-39760215 Phaseolus vulgaris
Phvul.002G226100 5.0kb upstream 5.0kb upstream 6811 true Chr02: 39760216-39767026 Phaseolus vulgaris
Phvul.002G226100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39762027-39767026 Phaseolus vulgaris
Phvul.002G226100 5.0kb downstream 5.0kb downstream 6811 true Chr02: 39755216-39762026 Phaseolus vulgaris
Phvul.002G226100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39755216-39760215 Phaseolus vulgaris
Phvul.002G226100 10.0kb upstream 10.0kb upstream 11811 true Chr02: 39760216-39772026 Phaseolus vulgaris
Phvul.002G226100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39762027-39772026 Phaseolus vulgaris
Phvul.002G226100 10.0kb downstream 10.0kb downstream 11811 true Chr02: 39750216-39762026 Phaseolus vulgaris
Phvul.002G226100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39750216-39760215 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312129 5265 Fabidae View MSA
124070502 5270 Rosid View MSA
123743613 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.30408 0.0 15.4021    
cufflinks 3.30149 0.0 10.133    
cufflinks 1.70685 0.0 5.62141   Low
cufflinks 10.8886 0.0 29.5638    
cufflinks 6.68199 0.0 19.0337    
cufflinks 4.315 0.0 12.8173    
cufflinks 9.24364 0.0 25.4341    
cufflinks 15.5595 0.0 41.0416   High
cufflinks 9.8101 0.0 26.8716    
cufflinks 2.69482 0.0 8.48724   Low
cufflinks 10.3767 0.0 28.4232    

0 Strain