Gene : Phvul.002G228400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10015//PTHR10015:SF155 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  2258
Name:  ? Phvul.002G228400 Secondary Identifier:  ? PAC:37174469
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G228400 0.5kb upstream 0.5kb upstream 2282 true Chr02: 39982011-39984292 Phaseolus vulgaris
Phvul.002G228400 0.5kb upstream 0.5kb upstream 500 false Chr02: 39983793-39984292 Phaseolus vulgaris
Phvul.002G228400 0.5kb downstream 0.5kb downstream 2282 true Chr02: 39981511-39983792 Phaseolus vulgaris
Phvul.002G228400 0.5kb downstream 0.5kb downstream 500 false Chr02: 39981511-39982010 Phaseolus vulgaris
Phvul.002G228400 1.0kb upstream 1.0kb upstream 2782 true Chr02: 39982011-39984792 Phaseolus vulgaris
Phvul.002G228400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39983793-39984792 Phaseolus vulgaris
Phvul.002G228400 1.0kb downstream 1.0kb downstream 2782 true Chr02: 39981011-39983792 Phaseolus vulgaris
Phvul.002G228400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39981011-39982010 Phaseolus vulgaris
Phvul.002G228400 2.0kb upstream 2.0kb upstream 3782 true Chr02: 39982011-39985792 Phaseolus vulgaris
Phvul.002G228400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39983793-39985792 Phaseolus vulgaris
Phvul.002G228400 2.0kb downstream 2.0kb downstream 3782 true Chr02: 39980011-39983792 Phaseolus vulgaris
Phvul.002G228400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39980011-39982010 Phaseolus vulgaris
Phvul.002G228400 5.0kb upstream 5.0kb upstream 6782 true Chr02: 39982011-39988792 Phaseolus vulgaris
Phvul.002G228400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39983793-39988792 Phaseolus vulgaris
Phvul.002G228400 5.0kb downstream 5.0kb downstream 6782 true Chr02: 39977011-39983792 Phaseolus vulgaris
Phvul.002G228400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39977011-39982010 Phaseolus vulgaris
Phvul.002G228400 10.0kb upstream 10.0kb upstream 11782 true Chr02: 39982011-39993792 Phaseolus vulgaris
Phvul.002G228400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39983793-39993792 Phaseolus vulgaris
Phvul.002G228400 10.0kb downstream 10.0kb downstream 11782 true Chr02: 39972011-39983792 Phaseolus vulgaris
Phvul.002G228400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39972011-39982010 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309010 5265 Fabidae View MSA
124071098 5270 Rosid View MSA
123742443 5271 Pentapetalae View MSA
122794927 5272 Eudicot View MSA
122049182 5273 Angiosperm View MSA
121311284 5274 Embryophyte View MSA
123348598 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.302877 0.0 1.27619 Low  
cufflinks 0.164721 0.0 0.733088 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.221214 0.0 0.959285 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.09583 0.0 4.15015   High
cufflinks 0.426065 0.0 1.73637 Low  
cufflinks 0.546037 0.0 2.1808    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain