Gene : Phvul.002G222500 P. vulgaris v2.1
Defline:  (1 of 1) K03351 - anaphase-promoting complex subunit 4 (APC4) Genomic Order:  2206
Name:  ? Phvul.002G222500 Secondary Identifier:  ? PAC:37175946
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G222500 0.5kb upstream 0.5kb upstream 18409 true Chr02: 39381203-39399611 Phaseolus vulgaris
Phvul.002G222500 0.5kb upstream 0.5kb upstream 500 false Chr02: 39381203-39381702 Phaseolus vulgaris
Phvul.002G222500 0.5kb downstream 0.5kb downstream 18409 true Chr02: 39381703-39400111 Phaseolus vulgaris
Phvul.002G222500 0.5kb downstream 0.5kb downstream 500 false Chr02: 39399612-39400111 Phaseolus vulgaris
Phvul.002G222500 1.0kb upstream 1.0kb upstream 18909 true Chr02: 39380703-39399611 Phaseolus vulgaris
Phvul.002G222500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39380703-39381702 Phaseolus vulgaris
Phvul.002G222500 1.0kb downstream 1.0kb downstream 18909 true Chr02: 39381703-39400611 Phaseolus vulgaris
Phvul.002G222500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39399612-39400611 Phaseolus vulgaris
Phvul.002G222500 2.0kb upstream 2.0kb upstream 19909 true Chr02: 39379703-39399611 Phaseolus vulgaris
Phvul.002G222500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39379703-39381702 Phaseolus vulgaris
Phvul.002G222500 2.0kb downstream 2.0kb downstream 19909 true Chr02: 39381703-39401611 Phaseolus vulgaris
Phvul.002G222500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39399612-39401611 Phaseolus vulgaris
Phvul.002G222500 5.0kb upstream 5.0kb upstream 22909 true Chr02: 39376703-39399611 Phaseolus vulgaris
Phvul.002G222500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39376703-39381702 Phaseolus vulgaris
Phvul.002G222500 5.0kb downstream 5.0kb downstream 22909 true Chr02: 39381703-39404611 Phaseolus vulgaris
Phvul.002G222500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39399612-39404611 Phaseolus vulgaris
Phvul.002G222500 10.0kb upstream 10.0kb upstream 27909 true Chr02: 39371703-39399611 Phaseolus vulgaris
Phvul.002G222500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39371703-39381702 Phaseolus vulgaris
Phvul.002G222500 10.0kb downstream 10.0kb downstream 27909 true Chr02: 39381703-39409611 Phaseolus vulgaris
Phvul.002G222500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39399612-39409611 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304106 5265 Fabidae View MSA
124066623 5270 Rosid View MSA
123738588 5271 Pentapetalae View MSA
122790448 5272 Eudicot View MSA
122042900 5273 Angiosperm View MSA
121345416 5274 Embryophyte View MSA
123423940 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.46745 0.0 4.67345    
cufflinks 2.62954 0.0 7.8495    
cufflinks 1.33151 0.0 4.27732   Low
cufflinks 1.49618 0.0 4.79735    
cufflinks 2.17322 0.0 6.6722    
cufflinks 2.03253 0.0 6.25265    
cufflinks 2.9172 0.0 8.63254   High
cufflinks 2.20285 0.0 6.68862    
cufflinks 2.88881 0.0 8.58433   High
cufflinks 1.13423 0.0 3.72598   Low
cufflinks 1.98763 0.0 6.16562    

0 Strain