Gene : Phvul.002G221500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22912:SF180 - 3-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN--NAD(+) REDUCTASE COMPONENT Genomic Order:  2193
Name:  ? Phvul.002G221500 Secondary Identifier:  ? PAC:37175304
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7279 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G221500 0.5kb upstream 0.5kb upstream 5292 true Chr02: 39236703-39241994 Phaseolus vulgaris
Phvul.002G221500 0.5kb upstream 0.5kb upstream 500 false Chr02: 39241495-39241994 Phaseolus vulgaris
Phvul.002G221500 0.5kb downstream 0.5kb downstream 5292 true Chr02: 39236203-39241494 Phaseolus vulgaris
Phvul.002G221500 0.5kb downstream 0.5kb downstream 500 false Chr02: 39236203-39236702 Phaseolus vulgaris
Phvul.002G221500 1.0kb upstream 1.0kb upstream 5792 true Chr02: 39236703-39242494 Phaseolus vulgaris
Phvul.002G221500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39241495-39242494 Phaseolus vulgaris
Phvul.002G221500 1.0kb downstream 1.0kb downstream 5792 true Chr02: 39235703-39241494 Phaseolus vulgaris
Phvul.002G221500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39235703-39236702 Phaseolus vulgaris
Phvul.002G221500 2.0kb upstream 2.0kb upstream 6792 true Chr02: 39236703-39243494 Phaseolus vulgaris
Phvul.002G221500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39241495-39243494 Phaseolus vulgaris
Phvul.002G221500 2.0kb downstream 2.0kb downstream 6792 true Chr02: 39234703-39241494 Phaseolus vulgaris
Phvul.002G221500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39234703-39236702 Phaseolus vulgaris
Phvul.002G221500 5.0kb upstream 5.0kb upstream 9792 true Chr02: 39236703-39246494 Phaseolus vulgaris
Phvul.002G221500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39241495-39246494 Phaseolus vulgaris
Phvul.002G221500 5.0kb downstream 5.0kb downstream 9792 true Chr02: 39231703-39241494 Phaseolus vulgaris
Phvul.002G221500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39231703-39236702 Phaseolus vulgaris
Phvul.002G221500 10.0kb upstream 10.0kb upstream 14792 true Chr02: 39236703-39251494 Phaseolus vulgaris
Phvul.002G221500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39241495-39251494 Phaseolus vulgaris
Phvul.002G221500 10.0kb downstream 10.0kb downstream 14792 true Chr02: 39226703-39241494 Phaseolus vulgaris
Phvul.002G221500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39226703-39236702 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313743 5265 Fabidae View MSA
124072571 5270 Rosid View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1431 0.0 36.6512    
cufflinks 9.63811 0.0 25.3677    
cufflinks 15.1856 0.0 39.2952    
cufflinks 28.2438 0.0 73.4791   High
cufflinks 6.44121 0.0 17.5775   Low
cufflinks 7.79965 0.0 20.8075    
cufflinks 21.5367 0.0 55.7552    
cufflinks 14.4294 0.0 37.3486    
cufflinks 28.8891 0.0 75.4198   High
cufflinks 6.41105 0.0 17.4015   Low
cufflinks 10.2226 0.0 26.8763    

0 Strain