Gene : Phvul.002G221900 P. vulgaris v2.1
Defline:  (1 of 6) PTHR32448:SF30 - BERBERINE BRIDGE ENZYME-LIKE PROTEIN-RELATED Genomic Order:  2200
Name:  ? Phvul.002G221900 Secondary Identifier:  ? PAC:37175712
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G221900 0.5kb upstream 0.5kb upstream 1974 true Chr02: 39328543-39330516 Phaseolus vulgaris
Phvul.002G221900 0.5kb upstream 0.5kb upstream 500 false Chr02: 39330017-39330516 Phaseolus vulgaris
Phvul.002G221900 0.5kb downstream 0.5kb downstream 1974 true Chr02: 39328043-39330016 Phaseolus vulgaris
Phvul.002G221900 0.5kb downstream 0.5kb downstream 500 false Chr02: 39328043-39328542 Phaseolus vulgaris
Phvul.002G221900 1.0kb upstream 1.0kb upstream 2474 true Chr02: 39328543-39331016 Phaseolus vulgaris
Phvul.002G221900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39330017-39331016 Phaseolus vulgaris
Phvul.002G221900 1.0kb downstream 1.0kb downstream 2474 true Chr02: 39327543-39330016 Phaseolus vulgaris
Phvul.002G221900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39327543-39328542 Phaseolus vulgaris
Phvul.002G221900 2.0kb upstream 2.0kb upstream 3474 true Chr02: 39328543-39332016 Phaseolus vulgaris
Phvul.002G221900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39330017-39332016 Phaseolus vulgaris
Phvul.002G221900 2.0kb downstream 2.0kb downstream 3474 true Chr02: 39326543-39330016 Phaseolus vulgaris
Phvul.002G221900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39326543-39328542 Phaseolus vulgaris
Phvul.002G221900 5.0kb upstream 5.0kb upstream 6474 true Chr02: 39328543-39335016 Phaseolus vulgaris
Phvul.002G221900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39330017-39335016 Phaseolus vulgaris
Phvul.002G221900 5.0kb downstream 5.0kb downstream 6474 true Chr02: 39323543-39330016 Phaseolus vulgaris
Phvul.002G221900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39323543-39328542 Phaseolus vulgaris
Phvul.002G221900 10.0kb upstream 10.0kb upstream 11474 true Chr02: 39328543-39340016 Phaseolus vulgaris
Phvul.002G221900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39330017-39340016 Phaseolus vulgaris
Phvul.002G221900 10.0kb downstream 10.0kb downstream 11474 true Chr02: 39318543-39330016 Phaseolus vulgaris
Phvul.002G221900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39318543-39328542 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312484 5265 Fabidae View MSA
124073888 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0458552 0.0 0.212576 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain