Gene : Phvul.002G208600 P. vulgaris v2.1
Defline:  (1 of 1) K12891 - splicing factor, arginine/serine-rich 2 (SFRS2) Genomic Order:  2063
Name:  ? Phvul.002G208600 Secondary Identifier:  ? PAC:37175052
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G208600 0.5kb upstream 0.5kb upstream 4664 true Chr02: 37519636-37524299 Phaseolus vulgaris
Phvul.002G208600 0.5kb upstream 0.5kb upstream 500 false Chr02: 37523800-37524299 Phaseolus vulgaris
Phvul.002G208600 0.5kb downstream 0.5kb downstream 4664 true Chr02: 37519136-37523799 Phaseolus vulgaris
Phvul.002G208600 0.5kb downstream 0.5kb downstream 500 false Chr02: 37519136-37519635 Phaseolus vulgaris
Phvul.002G208600 1.0kb upstream 1.0kb upstream 5164 true Chr02: 37519636-37524799 Phaseolus vulgaris
Phvul.002G208600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37523800-37524799 Phaseolus vulgaris
Phvul.002G208600 1.0kb downstream 1.0kb downstream 5164 true Chr02: 37518636-37523799 Phaseolus vulgaris
Phvul.002G208600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37518636-37519635 Phaseolus vulgaris
Phvul.002G208600 2.0kb upstream 2.0kb upstream 6164 true Chr02: 37519636-37525799 Phaseolus vulgaris
Phvul.002G208600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37523800-37525799 Phaseolus vulgaris
Phvul.002G208600 2.0kb downstream 2.0kb downstream 6164 true Chr02: 37517636-37523799 Phaseolus vulgaris
Phvul.002G208600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37517636-37519635 Phaseolus vulgaris
Phvul.002G208600 5.0kb upstream 5.0kb upstream 9164 true Chr02: 37519636-37528799 Phaseolus vulgaris
Phvul.002G208600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37523800-37528799 Phaseolus vulgaris
Phvul.002G208600 5.0kb downstream 5.0kb downstream 9164 true Chr02: 37514636-37523799 Phaseolus vulgaris
Phvul.002G208600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37514636-37519635 Phaseolus vulgaris
Phvul.002G208600 10.0kb upstream 10.0kb upstream 14164 true Chr02: 37519636-37533799 Phaseolus vulgaris
Phvul.002G208600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37523800-37533799 Phaseolus vulgaris
Phvul.002G208600 10.0kb downstream 10.0kb downstream 14164 true Chr02: 37509636-37523799 Phaseolus vulgaris
Phvul.002G208600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37509636-37519635 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301460 5265 Fabidae View MSA
124060793 5270 Rosid View MSA
123748547 5271 Pentapetalae View MSA
122794184 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.2379 0.0 238.138 High  
cufflinks 113.577 0.0 419.904 High High
cufflinks 37.1078 0.0 111.359   Low
cufflinks 98.501 0.0 357.471 High High
cufflinks 69.3323 0.0 239.611 High  
cufflinks 52.8566 0.0 179.583 High  
cufflinks 46.1201 0.0 154.316 High  
cufflinks 49.3791 0.0 165.395 High  
cufflinks 55.6065 0.0 190.855 High  
cufflinks 60.5571 0.0 206.327 High  
cufflinks 73.8289 0.0 253.95 High  

0 Strain