Gene : Phvul.002G215700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22601:SF11 - OLIGOPEPTIDE TRANSPORTER 4 Genomic Order:  2136
Name:  ? Phvul.002G215700 Secondary Identifier:  ? PAC:37174487
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G215700 0.5kb upstream 0.5kb upstream 3576 true Chr02: 38464528-38468103 Phaseolus vulgaris
Phvul.002G215700 0.5kb upstream 0.5kb upstream 500 false Chr02: 38467604-38468103 Phaseolus vulgaris
Phvul.002G215700 0.5kb downstream 0.5kb downstream 3576 true Chr02: 38464028-38467603 Phaseolus vulgaris
Phvul.002G215700 0.5kb downstream 0.5kb downstream 500 false Chr02: 38464028-38464527 Phaseolus vulgaris
Phvul.002G215700 1.0kb upstream 1.0kb upstream 4076 true Chr02: 38464528-38468603 Phaseolus vulgaris
Phvul.002G215700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38467604-38468603 Phaseolus vulgaris
Phvul.002G215700 1.0kb downstream 1.0kb downstream 4076 true Chr02: 38463528-38467603 Phaseolus vulgaris
Phvul.002G215700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38463528-38464527 Phaseolus vulgaris
Phvul.002G215700 2.0kb upstream 2.0kb upstream 5076 true Chr02: 38464528-38469603 Phaseolus vulgaris
Phvul.002G215700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38467604-38469603 Phaseolus vulgaris
Phvul.002G215700 2.0kb downstream 2.0kb downstream 5076 true Chr02: 38462528-38467603 Phaseolus vulgaris
Phvul.002G215700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38462528-38464527 Phaseolus vulgaris
Phvul.002G215700 5.0kb upstream 5.0kb upstream 8076 true Chr02: 38464528-38472603 Phaseolus vulgaris
Phvul.002G215700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38467604-38472603 Phaseolus vulgaris
Phvul.002G215700 5.0kb downstream 5.0kb downstream 8076 true Chr02: 38459528-38467603 Phaseolus vulgaris
Phvul.002G215700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38459528-38464527 Phaseolus vulgaris
Phvul.002G215700 10.0kb upstream 10.0kb upstream 13076 true Chr02: 38464528-38477603 Phaseolus vulgaris
Phvul.002G215700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38467604-38477603 Phaseolus vulgaris
Phvul.002G215700 10.0kb downstream 10.0kb downstream 13076 true Chr02: 38454528-38467603 Phaseolus vulgaris
Phvul.002G215700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38454528-38464527 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313320 5265 Fabidae View MSA
124072346 5270 Rosid View MSA
123738802 5271 Pentapetalae View MSA
122788637 5272 Eudicot View MSA
122046931 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0308754 0.0 0.142116 Low  
cufflinks 0.0145339 0.0 0.0725914 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0282748 0.0 0.13134 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0126406 0.0 0.0640025 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain