Gene : Phvul.002G215900 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31066:SF2 - GB Genomic Order:  2138
Name:  ? Phvul.002G215900 Secondary Identifier:  ? PAC:37178048
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G215900 0.5kb upstream 0.5kb upstream 2471 true Chr02: 38487471-38489941 Phaseolus vulgaris
Phvul.002G215900 0.5kb upstream 0.5kb upstream 500 false Chr02: 38489442-38489941 Phaseolus vulgaris
Phvul.002G215900 0.5kb downstream 0.5kb downstream 2471 true Chr02: 38486971-38489441 Phaseolus vulgaris
Phvul.002G215900 0.5kb downstream 0.5kb downstream 500 false Chr02: 38486971-38487470 Phaseolus vulgaris
Phvul.002G215900 1.0kb upstream 1.0kb upstream 2971 true Chr02: 38487471-38490441 Phaseolus vulgaris
Phvul.002G215900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38489442-38490441 Phaseolus vulgaris
Phvul.002G215900 1.0kb downstream 1.0kb downstream 2971 true Chr02: 38486471-38489441 Phaseolus vulgaris
Phvul.002G215900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38486471-38487470 Phaseolus vulgaris
Phvul.002G215900 2.0kb upstream 2.0kb upstream 3971 true Chr02: 38487471-38491441 Phaseolus vulgaris
Phvul.002G215900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38489442-38491441 Phaseolus vulgaris
Phvul.002G215900 2.0kb downstream 2.0kb downstream 3971 true Chr02: 38485471-38489441 Phaseolus vulgaris
Phvul.002G215900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38485471-38487470 Phaseolus vulgaris
Phvul.002G215900 5.0kb upstream 5.0kb upstream 6971 true Chr02: 38487471-38494441 Phaseolus vulgaris
Phvul.002G215900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38489442-38494441 Phaseolus vulgaris
Phvul.002G215900 5.0kb downstream 5.0kb downstream 6971 true Chr02: 38482471-38489441 Phaseolus vulgaris
Phvul.002G215900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38482471-38487470 Phaseolus vulgaris
Phvul.002G215900 10.0kb upstream 10.0kb upstream 11971 true Chr02: 38487471-38499441 Phaseolus vulgaris
Phvul.002G215900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38489442-38499441 Phaseolus vulgaris
Phvul.002G215900 10.0kb downstream 10.0kb downstream 11971 true Chr02: 38477471-38489441 Phaseolus vulgaris
Phvul.002G215900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38477471-38487470 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311739 5265 Fabidae View MSA
124072365 5270 Rosid View MSA
123740761 5271 Pentapetalae View MSA
122794728 5272 Eudicot View MSA
122047494 5273 Angiosperm View MSA
121310747 5274 Embryophyte View MSA
123348158 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.6554 0.0 137.317 High  
cufflinks 48.0094 0.0 129.248 High  
cufflinks 20.6627 0.0 53.4093   Low
cufflinks 83.4102 0.0 240.518 High High
cufflinks 80.2491 0.0 229.7 High High
cufflinks 22.5073 0.0 58.2442   Low
cufflinks 38.0512 0.0 101.408 High  
cufflinks 37.8205 0.0 100.102 High  
cufflinks 40.1672 0.0 107.294 High  
cufflinks 84.6926 0.0 242.66 High High
cufflinks 77.4817 0.0 221.093 High  

0 Strain