Gene : Phvul.002G214100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11922:SF42 - CLASS I GLUTAMINE AMIDOTRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2119
Name:  ? Phvul.002G214100 Secondary Identifier:  ? PAC:37175509
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G214100 0.5kb upstream 0.5kb upstream 2630 true Chr02: 38269716-38272345 Phaseolus vulgaris
Phvul.002G214100 0.5kb upstream 0.5kb upstream 500 false Chr02: 38271846-38272345 Phaseolus vulgaris
Phvul.002G214100 0.5kb downstream 0.5kb downstream 2630 true Chr02: 38269216-38271845 Phaseolus vulgaris
Phvul.002G214100 0.5kb downstream 0.5kb downstream 500 false Chr02: 38269216-38269715 Phaseolus vulgaris
Phvul.002G214100 1.0kb upstream 1.0kb upstream 3130 true Chr02: 38269716-38272845 Phaseolus vulgaris
Phvul.002G214100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38271846-38272845 Phaseolus vulgaris
Phvul.002G214100 1.0kb downstream 1.0kb downstream 3130 true Chr02: 38268716-38271845 Phaseolus vulgaris
Phvul.002G214100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38268716-38269715 Phaseolus vulgaris
Phvul.002G214100 2.0kb upstream 2.0kb upstream 4130 true Chr02: 38269716-38273845 Phaseolus vulgaris
Phvul.002G214100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38271846-38273845 Phaseolus vulgaris
Phvul.002G214100 2.0kb downstream 2.0kb downstream 4130 true Chr02: 38267716-38271845 Phaseolus vulgaris
Phvul.002G214100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38267716-38269715 Phaseolus vulgaris
Phvul.002G214100 5.0kb upstream 5.0kb upstream 7130 true Chr02: 38269716-38276845 Phaseolus vulgaris
Phvul.002G214100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38271846-38276845 Phaseolus vulgaris
Phvul.002G214100 5.0kb downstream 5.0kb downstream 7130 true Chr02: 38264716-38271845 Phaseolus vulgaris
Phvul.002G214100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38264716-38269715 Phaseolus vulgaris
Phvul.002G214100 10.0kb upstream 10.0kb upstream 12130 true Chr02: 38269716-38281845 Phaseolus vulgaris
Phvul.002G214100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38271846-38281845 Phaseolus vulgaris
Phvul.002G214100 10.0kb downstream 10.0kb downstream 12130 true Chr02: 38259716-38271845 Phaseolus vulgaris
Phvul.002G214100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38259716-38269715 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309039 5265 Fabidae View MSA
124070064 5270 Rosid View MSA
123742597 5271 Pentapetalae View MSA
122795576 5272 Eudicot View MSA
122050443 5273 Angiosperm View MSA
121350847 5274 Embryophyte View MSA
123426192 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 153.747 0.0 436.162 High High
cufflinks 55.8331 0.0 145.565 High  
cufflinks 2.32992 0.0 7.58137   Low
cufflinks 55.4329 0.0 144.27 High  
cufflinks 18.6994 0.0 49.3721    
cufflinks 2.9434 0.0 9.32094    
cufflinks 2.46729 0.0 7.92885   Low
cufflinks 3.40358 0.0 10.5851    
cufflinks 3.32467 0.0 10.341    
cufflinks 38.0452 0.0 98.3467 High  
cufflinks 30.3066 0.0 78.436    

0 Strain